Ectopseudomonas mendocina ymp: Pmen_0191
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Entry
Pmen_0191 CDS
T00510
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy02020
Two-component system
pmy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pmen_0191
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pmen_0191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmy03021
]
Pmen_0191
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmy02035
]
Pmen_0191
Transcription machinery [BR:
pmy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pmen_0191
Bacterial motility proteins [BR:
pmy02035
]
Flagellar system
Flagellar assembly proteins
Stator
Pmen_0191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HNH_repeat
HTH_38
GerE
DUF4143
Motif
Other DBs
NCBI-ProteinID:
ABP82965
UniProt:
A4XNP9
LinkDB
All DBs
Position
193427..194161
Genome browser
AA seq
244 aa
AA seq
DB search
MNATCAIDYRYAAEQGGAALFAPGAEQKWLLQYLPLVKRIVSQLALQANQVLDREDMEQI
GLMGLLECLRRYGTPDEQFGRFAALRIRGAILDELRRQDWRPRQVRQQTHRIRDAIRQLA
RQLGRVPQEEEILAAAGIDAKTYQEFLQADACEAIESLDELLQSGHEGFVCGASAVEERV
LKERLLTQALSQLSERERLVLTLYYQHELSLKEIALVLELSDARVCQLSKQAIAKASRYL
NERG
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccacctgcgccatcgactaccgctacgccgccgaacagggcggagccgcgctg
ttcgcccccggggccgagcagaagtggctgctgcagtacctgccgctggtcaagcgcatc
gtcagccagctggcgttgcaggccaaccaggtgctcgatcgcgaggacatggagcagatc
ggcctgatgggtctgctcgaatgcctgcgtcgctacggcacgccggacgaacagttcggt
cgcttcgctgcgctgcgcatccgtggcgcgattctcgacgagttgcgccgccaggactgg
cgaccgcgccaggtgcgtcagcagacccacaggattcgcgacgccatccgccagctggcc
cgccagctcggtcgcgtgccgcaggaggaggaaatcctcgccgccgccggcatcgacgcc
aagacctatcaggagtttctccaggccgacgcctgcgaggccatcgaaagcctcgacgag
ctgctgcagagcggccatgagggcttcgtctgcggtgccagcgcagtggaggagcgggtg
ctcaaggagcgcctgctgacccaggcgttgagccagctcagcgagcgcgaacggctggtg
ctgaccctttactaccaacacgagctgagcctcaaggaaatcgccctggtgctggagctg
agcgacgcgcgcgtctgtcagctgagcaagcaggcgatcgccaaggccagccgctacctg
aacgagagaggctag
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integrated database retrieval system
