Ectopseudomonas mendocina ymp: Pmen_0266
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Entry
Pmen_0266 CDS
T00510
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00300
Lysine biosynthesis
pmy00470
D-Amino acid metabolism
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
pmy01120
Microbial metabolism in diverse environments
pmy01230
Biosynthesis of amino acids
Module
pmy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pmen_0266
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pmen_0266
Enzymes [BR:
pmy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Pmen_0266
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DUF8756
Motif
Other DBs
NCBI-ProteinID:
ABP83040
UniProt:
A4XNX4
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All DBs
Position
complement(275540..276370)
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AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHTGVGFDQLLIVEPPSHPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKTIRVETKSGVIELRVQNDGQVCVNM
GAPRLEPAQVPFQAEQAALTYRVDVEGQSVELAALSMGNPHAVLRVDNVDSAPVHTLGPK
LEHHPRFPQRVNVGFLQVLDRKHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QLELPGGKLSIEWAGEGQPVMMTGPAARVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctattgcgctttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
atcagtcagcatgcccacgtgcaacccaaacatgccaagcagtggggcgaccgtcacacc
ggcgtcggcttcgatcagttgctgatcgtcgaaccgccgagccacccggacgtcgacttc
cgctaccgcatcttcaactccgacggctccgaggtggagcagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccaccaagaagaccattcgcgtcgag
accaagagcggcgtgatcgaactgcgcgtgcagaacgacggccaggtctgcgtcaacatg
ggcgcaccgcgtctggagccggcgcaggtgccgttccaggccgagcaggcggcgctgacc
tatcgcgtcgacgtcgaaggtcagagcgtcgagctggctgcgctgtcgatgggcaacccg
catgccgtgctgcgcgtcgacaacgtcgacagcgccccggtgcacaccctcggaccgaag
ctggaacatcacccgcgctttccgcagcgggtcaacgtcggcttcctgcaggtgctggac
cgcaagcatgcgcgcctgcgcgtgtgggagcgcggcgccggcgaaacccaggcctgcggc
accggcgcctgcgccgccgcggtcgcggcgattcgccagggctggatggattcgcccgtg
caactggaactgccaggcggcaaactgtccatcgaatgggcaggcgaaggtcagccggtt
atgatgaccgggcccgctgcccgcgtatacgaaggacaggttcgcctatga
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