Ectopseudomonas mendocina ymp: Pmen_0358
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Entry
Pmen_0358 CDS
T00510
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Pmen_0358
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
HHH_7
YqgF
T2SSK
DUF22
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ABP83131
UniProt:
A4XP65
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Position
complement(367332..369656)
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AA seq
774 aa
AA seq
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MDSINNRIAEELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEDRLRY
LRELDERRVAILASIEEQGKLTPELKREIDLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADALFNDPNLTPEQEAERFIDADKGFADVKAVLEGAKYILMERFAEDASLLDKLRS
FLKDNATLSARLVPGKENEGAKFSDYFEHDEPLKGVPSHRALAIFRGRNEGILSASLKVG
EELPGTLHPCELMIGERFGLQNQGRAADKWLAEVVRWTWKVKLYNHLETDLLGELREKAE
DEAIAVFARNLHDLLLAAPAGPRATLALDPGLRTGCKVAVVDATGKVLETATVYPHAPRN
DWDGTLAILAKLCAKHGVDLISIGNGTASRETDKLAAELIKKVPGLKLTKVMVSEAGASV
YSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARS
LDAVVEDCVNAVGVDVNTASAALLARISGLNATLAQNIVQYRDANGAFASRAELKKVPRL
GEKTFEQAAGFLRVMNGDNPLDASAVHPETYPLVERIAQDTGRDIRSLIGDSAFLKRLDP
AKFTDERFGLLTVGDILKELDKPGRDPRPEFKTAEFQEGVETLNDLKLGMVLEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPHEAVKAGDVVKVKVMEVDIPRNRIALSMRMG
DTPGEKVEGARGGARGGNRGGNTPRSERHSSQDKPAPATGGMAALFANAKQLKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacaaccgcatcgccgaagagctgggcgtgcgcccgcaacaggtcgcc
gccgccgtggccctgctcgacgaaggctccaccgtgcccttcatcgcccgttaccgtaaa
gaagtgaccggcagcctcgacgacacccagctgcgccatctggaagatcgcctgcgctac
ctgcgcgagctggacgagcgccgcgtggcgatcctcgccagcatcgaggaacagggcaag
ctgacccccgaactcaagcgcgagatcgacctggccgacaccaagacgcgcctcgaagac
ctgtatctgccgtacaagcagaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgagctggccgatgcgctgttcaacgatccgaacctgaccccggagcaggaagcc
gagcgcttcatcgacgccgacaaaggcttcgccgacgtcaaggccgtgctcgaaggcgcc
aagtacatcctcatggagcgttttgcagaggacgcgagcctgctggacaagctgcgcagc
ttcctcaaggacaacgccaccctcagcgcccgcctggtgccgggcaaggaaaacgagggc
gccaagttcagcgactacttcgagcacgacgagccgcttaagggcgtgccgtcgcaccgc
gcgctggcgatcttccgcggccgcaacgaaggcattctcagcgccagcctcaaggtcggc
gaagagctgcccggtaccctgcacccctgcgagctgatgatcggcgagcgcttcggcctg
cagaaccagggccgcgccgccgacaagtggctggccgaggtggtgcgctggacctggaag
gtcaagctgtacaaccacctggaaaccgacctgctcggcgagctgcgcgagaaggccgag
gacgaggcgattgccgtgttcgcccgcaacctgcacgacctgctgctggccgcgccggcc
ggcccgcgcgccaccctggcgctggacccgggcctgcgcaccggctgcaaggtggcggtg
gtcgatgccaccggcaaggtgctggaaaccgccaccgtctacccgcacgccccgcgcaac
gactgggacggcaccttggccatcctcgccaagctgtgcgccaagcacggcgtcgacctg
atctccattggcaacggcaccgccagccgcgagaccgacaagctggccgccgagctgatc
aagaaggtgccgggcctgaagctgaccaaggtgatggtctccgaagccggcgcctcggtg
tattcggcctcggaactggccgcccgcgagttccccgatctcgacgtgtcgctgcgcggc
gcagtgagcatcgcccgccgcctgcaggatcccctggccgagctggtgaagatcgacccg
aaatccatcggcgtcggccagtaccagcacgatgtgtcgcagctcaagctggcgcgctcg
ctggacgccgtggtcgaggactgcgtgaacgccgttggcgtcgatgtgaacaccgcctcc
gccgccctgctggcacgcatttccggcctcaacgcgaccctggcgcagaacatcgtgcag
taccgcgatgccaacggcgccttcgcctcgcgcgccgagctgaagaaggtgccgcgcctg
ggcgagaagaccttcgagcaggccgccggcttcttgcgagtgatgaacggcgacaacccg
ctggatgcctccgcggtgcacccggaaacctacccgctggtcgagcgcatcgcccaggac
accggccgcgacatccgctcgctgatcggcgactcggccttcctcaagcgcctcgacccg
gccaagttcaccgacgagcgcttcggcctgctcaccgtcggcgacatcctcaaggaactg
gacaagcccggccgcgacccgcgcccggaattcaagaccgccgagttccaggagggcgtg
gaaaccctcaatgacctcaagctgggcatggtgctcgaaggcgtggtgaccaacgtcacc
aacttcggcgccttcgtcgacatcggtgtgcaccaggacggcctggtgcacatcagcgcg
ctgtcggagaagttcatcaaggacccgcacgaggcggtcaaggccggcgacgtggtcaag
gtcaaggtgatggaagtggacatcccgcgtaaccgcatcgccctgtccatgcgcatgggc
gacaccccgggcgagaaggtagagggcgcacgcggtggtgcgcgcggcggcaaccgtggc
ggcaatacgccgcgcagcgagcgccattccagccaggacaagccggcaccggccaccggg
ggcatggccgcgctgttcgccaacgccaagcagctcaagcgatga
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