Ectopseudomonas mendocina ymp: Pmen_0388
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Entry
Pmen_0388 CDS
T00510
Name
(GenBank) formate dehydrogenase beta subunit
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00630
Glyoxylate and dicarboxylate metabolism
pmy00680
Methane metabolism
pmy01100
Metabolic pathways
pmy01120
Microbial metabolism in diverse environments
pmy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pmen_0388
09102 Energy metabolism
00680 Methane metabolism
Pmen_0388
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Gene cluster
GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
SLBB_2
SLBB
Motif
Other DBs
NCBI-ProteinID:
ABP83161
UniProt:
A4XP95
LinkDB
All DBs
Position
402470..404041
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AA seq
523 aa
AA seq
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MSEPIKIFVPRDATALSLGADKVAKAIAAEAAARGIEVQLVRNGSRGLFWLEPLVEVATP
TGRVAYGPVKARDVAGLFDAGFLEGKQHALGHGLTDEIDYLKRQERLTFARVGITDPLSL
EDYIAHDGYRGLKRALGMTPEAIVAEVTESGLRGRGGAAFPTGIKWRTVLGCQAEQKYIV
CNADEGDSGTFSDRMVMEDDPYVLIEGMTIAGLAVGATKGYIYLRSEYPHAEAVLLETIA
RATAAGYLGDDVLGSGKAFHLELRRGAGAYICGEETALLESIEGKRGTVRPKPPLPAIEG
LFGKPTVINNVISLASVPIILDKGGAYYKDYGMGRSLGTLPIQLTGNIARGGLIEKAFGI
TLRELLYEYGGGSASGRPIRAVQVGGPLGAYLPESQFDTPLDYEAFAALGAVLGHGGIVV
FDDTVDMADMARYAMEFCAVESCGKCTPCRIGSTRGEELLSQIIVARSEGPQPGRIELLK
SLCDTMLGASLCALGGMTPYPVLSAINHFPEDFGVSQDSAEAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaccgatcaagatcttcgtcccgcgcgatgccaccgcgctcagcctgggcgcc
gacaaggtagccaaggccatcgccgccgaggccgcggcgcgtggtatcgaggtgcaactg
gtgcgcaacggctcacgcgggctgttctggctagagccgctggtcgaggtcgccacgccg
actggtcgcgtggcctatggcccggtcaaggcacgcgatgtcgctggtttgttcgatgcc
ggtttcctcgagggtaagcagcatgcgctgggccatggcctgaccgacgaaatcgactac
ctcaagcgccaggagcgcctgaccttcgcccgtgtcggcatcaccgatccgctgtcgctg
gaggactacatcgcccacgacggctaccgcggcctcaagcgcgccctcggcatgacgccc
gaagcgatcgtcgccgaggtcaccgaatccggcctgcgtggtcgtggcggcgcggcgttc
cccaccggcatcaagtggcgcaccgtgctcggttgccaggccgaacagaagtacatcgtc
tgcaacgccgacgaaggcgactcgggcaccttctccgaccgcatggtgatggaagacgac
ccctacgtgctgatcgaaggcatgaccatcgccggtctcgctgtcggcgccaccaagggc
tatatctacctgcgttctgaatacccgcacgccgaggcggtgctgctcgagaccatcgcc
cgtgccacggccgccggttacctgggcgatgacgtgctcggcagcggcaaggccttccac
ctggagctgcgccgcggcgccggcgcctatatctgcggcgaggaaaccgcgcttctggaa
agcatcgagggtaagcgcggcaccgtgcggccgaagccgccgctgccggccatcgagggc
ctgttcggcaaaccgacggtgatcaacaacgtgatctcgctggcttcggtgccgatcatc
ctcgacaagggcggcgcctactacaaggactacggtatgggccgctcgctcggcaccctg
ccgatccagctgaccggcaacatcgcccgtggcggcctgatcgagaaggccttcggtatc
accttgcgcgagttgctctacgaatatggcggcggttcggccagcggccggccgatccgc
gcggtgcaggtcggcggcccgctcggcgcttacctgcccgagtcgcagttcgacacgccg
ctggattacgaggccttcgccgctctcggcgcggtgctcggccacggcggcatcgtggtg
ttcgacgacaccgtcgacatggccgacatggcgcgctacgccatggagttctgcgcggtg
gaatcctgcggcaagtgcacgccctgccggatcggctcgacccgcggcgaggagctgctg
tcgcagatcatcgtggcccgttccgaaggcccgcagccggggcgcatcgaactgctcaag
agcctctgcgacaccatgctcggcgcctcgctctgcgcccttggcggcatgacaccctat
ccggtgctgagcgccatcaaccactttcccgaggacttcggcgtgtcgcaagacagcgcc
gaagcccgctga
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