Pseudomonas mendocina ymp: Pmen_0389
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Entry
Pmen_0389 CDS
T00510
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00630
Glyoxylate and dicarboxylate metabolism
pmy00680
Methane metabolism
pmy01100
Metabolic pathways
pmy01120
Microbial metabolism in diverse environments
pmy01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pmen_0389
09102 Energy metabolism
00680 Methane metabolism
Pmen_0389
Enzymes [BR:
pmy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Pmen_0389
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_10
Fer4_21
Nqo3_Fer4
Fer4_9
Fer4_6
Fer4_2
Fer4_4
Fer4_15
Fer4_8
Fer4_16
Fer4_13
NDSU1_4Fe-4S
Motif
Other DBs
NCBI-ProteinID:
ABP83162
UniProt:
A4XP96
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All DBs
Position
404057..406891
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AA seq
944 aa
AA seq
DB search
MALYRELDYGTPARSGAPVTLEIDGNAITVPAGTSLMRAAQEAGIAVPKLCASDSLEPFG
SCRLCMVEIEGRRGFPASCTTPVEPGMVVRTQSPKLAELRRGTMELYISDHPLDCLTCSA
NGNCELQDMAGVVGLREVRYDPVKTHLAEAKDESNPYFSYDPSKCIVCNRCVRACEEVQG
TFALTIDGRGFDSRVAAGQAEDFLDSECVSCGACVNACPTATLMEKSVIELGQAERSVAT
TCAYCGVGCSFNAEVKGNTVVRMVPNKNGHANHGHACVKGRFAWGYATHPDRIKTPMIRD
SIHEPWRSVSWDEAIGYAARRFKEIQAQYGRNAVGGLTSSRCTNEETYLVQKLVRAAFGN
NNVDTCARVCHSPTGYGLKVTLGESAGTQDFDSVLSADVVLVIGANPTDGHPVFGSQLKR
RLREGAKLIVADPRGIDLVRSPHIRAEHHLQLRPGSNVALLNSLGHVIATEGLINEAFVA
ERCEAEAFEQWRTFVSEQRNSPEAMEVLTGVPAASVRAAARLYATGGNAAIYYGLGVTEH
SQGSSTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHVSDPVA
RPQFEAAWGVKLLDEPGLRIPNMLAAAHAGTFKGMYIQGEDPAQSDPDTQHVTDALKAME
CVVVQDLFLNETAKYAHVFLPGASFLEKNGTFTNAERRISPVRKVMPALAGKEDWEVTVA
LSNALGYPMNYKHPSEIMDEIAALTPTFTGVSYAKLDRLGSIQWPCNDEAPEGTPIMHED
AFVRGKGRFVVTEFIPTEERTSRKRPLVLTTGRILSQYNVGAQTRRTANKAWHAEDILEL
HPVDAEDRGIKDGDWVGINSRAGETVMRAKVTERMQPGVVYTTFHHPESGANVITTDNSD
WATNCPEYKVTAVQVCKVEVPSQWQQEFDTFTREQVSLLPVVQL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtatcgtgaactcgactatggcacccctgctcgcagcggtgctccggtaacc
ctggaaatcgacggcaacgccatcaccgtgccggccggcacctcgctgatgcgcgcggcc
caggaggccggcatcgccgtgcccaagctgtgcgccagcgacagcctggagccgttcggc
tcgtgccgcctgtgcatggtggaaatcgaaggccgccgcggcttccccgcctcctgcacc
acgccggtggagccgggcatggtggtgcgcacgcagagcccgaaactggccgaactgcgt
cgcggcaccatggagctgtatatctccgaccacccgctggactgcctgacctgctcggcc
aacggcaactgcgagctgcaggacatggccggtgtggtcggcctgcgcgaggtgcgctac
gacccggtgaagacgcacctggccgaggccaaggacgagtccaacccctatttcagctac
gacccgtccaagtgcatcgtctgcaaccgctgcgtgcgcgcctgcgaggaagtgcagggc
accttcgccctgaccatcgacggccgcggcttcgattcgcgcgtagccgccggccaggcc
gaggatttcctcgactccgagtgcgtgtcctgcggtgcctgcgtcaacgcctgcccgact
gccacgctgatggaaaagtcggtgatcgagctgggccaggccgagcgcagcgtcgccacc
acctgcgcctactgcggcgttggctgctcgttcaacgccgaggtcaagggcaacaccgtg
gtgcgcatggtgccgaacaagaacggccacgccaaccacggccacgcctgcgtcaagggc
cgcttcgcctggggctacgcgacccacccggaccgcatcaagaccccgatgatccgcgac
agcatccatgagccgtggcgctcggtgagctgggacgaggccatcggctacgccgcccgg
cgcttcaaggaaatccaggcacagtatggccgcaatgcggtcggcgggctgacctcctcg
cgctgcaccaacgaggaaacctacctggtgcagaagctggtgcgcgccgccttcggcaac
aacaacgtcgatacctgcgcacgtgtctgccactcgccgaccggctacggcctcaaggtg
accctcggtgaatcggccggtacccaggatttcgactcggtgctgtccgccgacgtggtg
ctggtgatcggtgccaaccccaccgacggccacccggtgttcggctcgcagctcaagcgc
cgcctgcgcgagggcgccaagctgatcgtcgccgacccgcgcggcatcgacctggtgcgc
agcccgcacatccgcgccgagcatcacctgcagctgcgtccgggcagcaacgtcgccctg
ctcaacagcctgggccatgtgatcgccaccgagggcctgatcaacgaggccttcgtcgcc
gagcgctgcgaggccgaagccttcgagcaatggcgcaccttcgtcagcgaacagcgcaac
agccccgaggccatggaagtcctgaccggcgtaccggccgcttcggtgcgcgctgccgcg
cgcctgtacgctaccggtggcaacgcggcgatctactacggcctgggcgtcaccgagcac
agccagggctcgtccaccgtgatggcgatcgccaacctggccatggccaccggcaatatc
ggccgtccgggtgtcggcgtgaacccgctgcgcggacagaacaacgtgcagggctcctgc
gacatgggctccttcccccacgagctgccgggctaccgccacgtttccgatccggtggcg
cggccgcagttcgaggccgcctggggcgtcaagctgctcgacgagccgggcctgcgcatc
cccaacatgctcgccgcggcgcatgccggcaccttcaagggcatgtacatccagggcgag
gacccggcgcagtccgaccccgacacccagcacgtcaccgatgcgctcaaggccatggag
tgcgtggtggtgcaggacctgttcctcaacgaaaccgccaagtacgcccacgtgttcctg
cctggcgcctccttcctggagaagaacggcaccttcaccaatgccgagcggcgcatctcg
ccggtgcgcaaggtgatgccggcgctggccggcaaggaagactgggaagtgaccgtggcg
ttgtccaacgccctcggctacccgatgaactacaagcatccgtccgagatcatggacgag
atcgccgcgctgacgccgaccttcactggtgtcagctacgccaagctcgaccgcctgggc
agcatccagtggccgtgcaacgacgaggcgccggaaggcacgccgatcatgcacgaggac
gccttcgtacgtggcaaggggcgcttcgtggtcaccgagttcatccccaccgaggagcgc
acctcgcgcaagcggccgctggtgctgaccaccgggcgcatcctttcgcagtacaacgtc
ggcgcgcagacccggcgcaccgccaacaaggcctggcacgccgaggacatcctcgagctg
cacccggtggacgccgaggatcgcggcatcaaggacggcgactgggtcggcatcaacagc
cgtgccggcgagacggtgatgcgcgccaaggtcaccgagcgcatgcagccgggcgtggtg
tacaccaccttccaccacccggaatccggcgccaacgtgatcaccacggacaactccgac
tgggccaccaactgcccggagtacaaggtcaccgcggtgcaggtgtgcaaggtcgaagtc
ccgtcgcagtggcagcaggagttcgacaccttcacccgcgagcaggtcagcctgctgccg
gtggtgcagctatga
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