Ectopseudomonas mendocina ymp: Pmen_0471
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Entry
Pmen_0471 CDS
T00510
Name
(GenBank) Nodulation efficiency protein NfeD
KO
K07403
membrane-bound serine protease (ClpP class)
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99975 Protein processing
Pmen_0471
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NfeD_membrane
NfeD1b_N
NfeD
Rv1476
S1_TP0910
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
ABP83241
LinkDB
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Position
501656..503101
Genome browser
AA seq
481 aa
AA seq
DB search
MLRKGPPPRVRYQCGSRESNVLPGWLRLCLCALILCASVGVSAAPGAVVQLQVDGVIGPA
SADYLVRGLAKAVDEGAQLVVIEIDTPGGLDTAMRAIIKAILASPIPVASYVAPGGARAA
SAGTYILYASHVAAMTPGTNLGAATPVAIGMPGAPSQPEGDDKGEKDKATQGDKGTGDAM
TAKQVNDAAAYIRGLANMRGRNAEWAEQAVREAVSLSAEEALEQKVIDYLARDTADLLRQ
LDGKTLQAAGVELTLATAGAPLISHAPDWRTRLLAVITNPSVALILMMIGVYGLFFEFSN
PGSGVGGVLGGISLVLALYALQLLPVNYAGVALILLGIAFITAEAFLPSFGVLGIGGVVA
FVFGGLILIDTDVPGFGIPLALIITLALVSAALILAIVGMALRARRRQQVAGDSGLVGSL
VAIAAVREDDPRAGWVALQGERWQVQGAAPLQPGQQVRVTAREGVHLQVSAVDEPPPRGG
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaaagggaccgccgccacgggttcggtatcaatgcggttctcgggagtcgaac
gtgttgcctggctggttgcgtctgtgtctgtgtgccctgatcctctgcgcatcggtaggg
gtgagtgcggcgccgggggcggtggtgcagttgcaggtggacggcgtgatcggcccggcc
agcgccgactacctggtgcgcggcctggccaaggcggtggacgagggcgcgcagctggtg
gtgatcgagatcgacacccccggcgggctggataccgccatgcgtgccatcatcaaggcg
attctcgccagccccatcccggtggccagctacgtcgcgcccggcggtgcgcgggcggcc
agcgccggcacctacatcctctatgccagtcatgtcgcggccatgacgccgggcaccaac
ctcggcgccgccacaccggtggccatcggcatgccgggagcgccgagccagcccgagggg
gatgacaagggcgagaaggacaaggccacgcaaggcgacaaggggacgggcgatgccatg
accgccaagcaggtcaacgacgccgccgcctatatccgcggcctggccaacatgcgcggg
cgcaatgccgagtgggccgagcaggcggtgcgcgaggccgtcagcctgtccgccgaggag
gcgctggagcagaaggtgatcgactacctggccagggacacggccgatctgctgcgccag
ctcgacggcaagaccctgcaggccgcgggcgtcgagctgaccctggccaccgccggcgcg
ccgctgatcagccacgcgccggactggcgcacccggctgctggccgtgatcaccaacccc
agcgtggcgctgatcctgatgatgatcggcgtctacggcctgttcttcgaattctccaat
cccggcagcggcgtcggtggcgtgctcggcggcatcagcctggtactcgccctctatgcc
ctgcaactgctgccggtgaactacgccggggtggcgctgatcctgctcggcatcgccttc
atcaccgccgaggccttcctgcccagcttcggcgtgctcggcatcggcggggtggtggcc
ttcgtcttcggtgggctgatcctgatcgacaccgacgtgccgggtttcggcatcccgctg
gcgctgatcatcaccctggcgctggtcagcgccgcgctgatcctggccatcgtcggcatg
gcgctcagggccaggcgacgtcagcaggtggccggtgacagcggtctggtcggcagcctg
gtggccatcgccgcggtgcgtgaggacgatccacgcgccggctgggtggcactgcagggc
gaacgctggcaggtgcagggcgctgcgccgctgcagcccgggcagcaggtacgagtcacc
gcgcgcgagggcgtgcatctacaggtcagcgcggtggatgagccgccgccccgaggaggt
aactga
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