Ectopseudomonas mendocina ymp: Pmen_0474
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Entry
Pmen_0474 CDS
T00510
Name
(GenBank) intradiol ring-cleavage dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00362
Benzoate degradation
pmy01100
Metabolic pathways
pmy01120
Microbial metabolism in diverse environments
pmy01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pmen_0474
00624 Polycyclic aromatic hydrocarbon degradation
Pmen_0474
Enzymes [BR:
pmy01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Pmen_0474
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
TRADD-like_N
Motif
Other DBs
NCBI-ProteinID:
ABP83244
UniProt:
A4XPH8
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All DBs
Position
505225..505968
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AA seq
247 aa
AA seq
DB search
MGRPQPFGQRLIARQRHRLRPRWPLRRRTRAVEESTMSSRRHLLLAAGGALLASPSLVLA
ERLLTPRQTLGPFYPDQLPLDNDNDLVQVEGRAEEARGIRVQLHGSILDAGGRPLAGALV
EIWQVDANGIYLHSRGGDRQRLDPGFQGYGRFVTEADGRYGFRTIRPVSYPGRTPHIHLA
VTLPGMPRFATQCYIRGEPGNQRDGLLNAIRDPRLRELLIVPFVPVSGQVNQQIARFDVV
LGVTPAS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggggcggccgcagccgttcgggcagcggctgattgcgagacagcgccaccggctccgg
ccacgctggccgcttcgaaggcgaacccgcgccgtggaggaaagcaccatgtccagccgt
cgccatctcctgctcgccgccggcggcgccctgctggccagcccttcgctggtgctggcc
gagcgcctgctgacgccgcggcagacgctgggccccttctaccccgaccaactgccgctc
gataacgacaacgacctggtgcaggtcgaaggccgggccgaggaggcgcgcggcattcgc
gtgcagttgcacggctcgatcctcgatgccggcggtcggccgctggccggggcgctggtg
gaaatctggcaggtcgatgccaacggcatctacctgcacagccgtggcggcgatcgccag
cggctcgaccccggttttcagggctatggccgcttcgtcacggaggcggacggtcgttat
ggctttcgcaccatccgcccggtgtcctatcccggacgtaccccgcatatccacctggcg
gtgaccctgcccggcatgccgcgcttcgccacccagtgctatatccgcggcgagccgggc
aaccagcgcgacggtctgctcaacgccatccgcgatccacgcctgcgcgaactgctgatc
gtgcctttcgtgccggtgagcgggcaggtcaaccagcagattgcccgcttcgatgtggtc
ctcggcgtcaccccggcctcatga
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