Ectopseudomonas mendocina ymp: Pmen_0498
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Entry
Pmen_0498 CDS
T00510
Name
(GenBank) transcriptional regulator, AraC family with amidase-like domain
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmy03000
]
Pmen_0498
Transcription factors [BR:
pmy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Pmen_0498
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
DUF746
Tab2-like_C
HTH_Tnp_ISL3
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
ABP83268
UniProt:
A4XPK2
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All DBs
Position
complement(535258..536208)
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AA seq
316 aa
AA seq
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MTQTFAFLLLPGFSMIGLMSAIEPLRVANRFRGELYRWRLLSLDSEAVAASNGMSLNVEA
GLELPEDTQALFVVAGFEPLAHYDKRLAHWLQRREREVKVLGAIDTGSFVLAEAGLFEQQ
RLTLHWEAIDAFCERYPQLQVTQELFEIDGRRITSAGGTSSLDLMLGLIGRDHGEPLAVQ
VSEQFVLGRIRTRQDHQRMQIASRYDLHNKKLVRVIGEMERHCDQPLPCEELAEQVGVSV
RQLERLFRHHLNTTPSAFYLGLRLDKARQLLRQSDLSVLEVGLACGFDSASYFSRCYRQH
FAASPSQDRHERPAPS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaccttcgccttcctgctgcttcccggtttttcgatgataggcctgatgtcg
gccatcgagccgctgcgcgtggccaaccgctttcgcggcgagctgtaccgctggcgcctg
ctcagcctggacagcgaggcggtggcggcgagcaacggcatgtcgctcaacgtcgaggcc
gggctggagctgccggaggacacccaggcgctgttcgtggtcgccggtttcgagcccctg
gcgcattacgacaagcgcctggcgcattggctgcaacgccgcgaacgcgaggtgaaggtg
ctcggtgccatcgacaccggcagcttcgtgctggccgaggccgggctgttcgagcagcag
cgcctgaccctgcactgggaggcgatcgacgccttctgcgagcgctatccgcagctgcag
gtaacccaggagctgttcgagatcgatggccggcgcatcaccagcgccggcggcaccagc
agcctcgacctgatgctcgggctgatcggccgggatcacggcgaaccgctggcggtgcag
gtctccgagcagttcgtgctcggtcgcatccgcacccgccaggaccaccagcgcatgcag
atcgccagccgctacgacctgcacaacaagaaactggtacgggtgatcggcgagatggag
cgccactgcgatcagccactgccctgcgaggagctggccgagcaggtcggggtcagcgtg
cgccagctggagcgactgttccgccatcacctgaacaccacaccctcggccttctacctc
ggcttgcgcctggacaaggcgcgccagctgctgcgccagagcgatctgagcgtgctggag
gtgggcctggcctgcggcttcgactcggcgtcgtatttctcgcgctgctaccgccagcac
ttcgccgccagccccagccaggatcgtcacgagcggccggcacccagctaa
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