KEGG   Ectopseudomonas mendocina ymp: Pmen_0820
Entry
Pmen_0820         CDS       T00510                                 
Name
(GenBank) Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pmy  Ectopseudomonas mendocina ymp
Pathway
pmy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pmen_0820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmy02044]
    Pmen_0820
Secretion system [BR:pmy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pmen_0820
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345
Other DBs
NCBI-ProteinID: ABP83588
UniProt: A4XQH2
LinkDB
Position
complement(931925..934009)
AA seq 694 aa
MLDANQAHITLAIPAVDNDLQVLSFEGREALNKPYRFDIELVSQRADLDLDALINQTAYL
AFGPSGKGVHGVLYAIEQGDSGKRLTRYRISLRPQLAYLAHRHNQRIFQHLTVPQIIGQI
LEEHGIQSDAYQFQLGYLYPERDYCVQYDESDLHFIQRLCEEEGISFHFQHSEDSHRLVF
GDDASVFPKLDPLNYQQGSGLAADHEVVRAFGVRLETRSTHATWRDYDFEQPKLRMEADY
RSEFSPALEVYDYPGRFTDRTRGKHLAKRSLERLRSDYELAEGKSDAYLISGHFLALAGH
PRQQWNDLWLLDEVIHEGKQPQVLEESVTSNTQPGDGFQQGYRNRFTATPWDIPYRPALE
HRKPKVLGSQTAVVTGPAGEEIHCDQYGRVKVQFHWDREGLGNDTTSCWLRVASNWAGKA
YGGIAIPRVGMEVLVTFLEGDPDQPLITGCLYHTEHVVPYDLPANKTRSVFKTLSSPGGG
GYNEFRIEDRKGAEQIYIHAQRDWDENIENNQKIRVGNERHDTVEANSYTELQAEEHRTT
DLDRKVEVRANDHLTVAVTQHNKIGTGQFIEAGNEIHYNAGSKVVIDAGMELTAAGGGSF
LKLDPSGVTLSGATIKMNSGGGPGSGSGLKILGPLIPWAADADKAGQKPELALANAQLQL
AVKARQLAASRCPICEACREGLCDLPTRAGGAQG
NT seq 2085 nt   +upstreamnt  +downstreamnt
atgctggatgccaaccaggcgcatatcaccctcgccattcccgccgtcgacaacgacctg
caggtactgagcttcgaggggcgcgaagcgctcaacaagccctaccgtttcgatatcgag
ctggtcagccagcgcgccgatctcgacctcgacgcgctgatcaaccagaccgcctatctg
gccttcggcccctccggcaagggcgtgcatggcgtgctctacgccatcgaacagggcgac
tcgggcaagcgcctgacgcgctaccgcatcagcctgcggccgcagctcgcctatctggct
catcgccacaaccagcgcatcttccagcacctcaccgtgccgcagatcatcggccagatc
ctcgaagagcacggcatccagagcgacgcctatcagttccagctcggttacctctaccct
gaacgcgactactgcgtgcagtacgacgagagtgacctgcacttcatccagcgcctgtgc
gaggaagaaggcatcagcttccacttccagcacagcgaagacagccaccgcctggtgttc
ggcgacgacgccagcgtcttccccaagctcgatccgctgaattaccagcaaggcagcggc
ctggccgccgatcacgaagtggtacgcgccttcggcgtgcgcctggaaacccgaagcacc
catgccacctggcgcgactacgacttcgagcagcccaaactgaggatggaagcggactac
cgcagcgagttcagcccggcgctggaagtctacgactaccctggtcgcttcaccgaccgc
acgcgcggcaagcacctggccaaacggagcctggagcgcctgcgcagcgactacgaactg
gccgaaggcaagagcgatgcgtacctgatcagcggccacttcctcgccctggccggccac
ccgcgccagcagtggaacgatctgtggctactcgatgaagtgattcacgaaggcaagcag
ccgcaggtgctggaggagtcggtcaccagcaacacccagcctggcgatggcttccagcag
ggctaccgcaaccgcttcaccgccacgccctgggacatcccctaccgcccggcgctcgaa
catcgcaaacccaaggtactgggtagccagacggccgtggtcaccggcccggctggcgag
gaaatccactgcgaccagtacggccgagtgaaggtgcagttccattgggaccgcgaaggc
ctgggcaacgacaccaccagttgctggctgcgcgtggcctccaactgggccggcaaggcc
tacggcggcatcgccattccccgggtgggcatggaggtgctggtcaccttcctcgaaggc
gaccccgaccagccgctgatcaccggctgcctgtaccacaccgagcacgtcgtgccttac
gacctgccggcgaacaagacccgcagcgtcttcaagaccctgagcagcccgggtggtggc
ggctacaacgaatttcgcatcgaagaccgcaagggcgccgagcagatctacatccacgcc
cagcgcgactgggacgagaacatcgaaaacaaccagaagatccgcgtcggcaacgagcgc
cacgatacggtcgaagccaacagctacaccgagcttcaggccgaagaacaccgcaccacc
gacctcgaccgcaaagtggaagtgcgagccaacgaccacctcaccgtcgccgtcacccag
cacaacaagatcggtaccggccagttcatcgaagccggcaacgagattcactacaacgcc
ggcagcaaggtggtgatcgacgctggcatggagctcaccgccgcaggtggcggcagcttc
ctcaagctcgacccgagtggcgtgacgctgagtggggcgacgatcaagatgaattcgggg
ggcgggccgggtagtgggtcggggttgaaaatactggggccgttgattccgtgggcggcg
gatgcggataaggccgggcagaaacccgagctggcattggcaaacgcccagttgcagctt
gccgtcaaggctcgccaactggctgcaagccgctgccccatctgtgaggcttgccgtgaa
gggctgtgcgatctgccgactcgggccggaggggctcaaggatga

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