Ectopseudomonas mendocina ymp: Pmen_1146
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Entry
Pmen_1146 CDS
T00510
Name
(GenBank) protein of unknown function DUF181
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmy03009
]
Pmen_1146
Ribosome biogenesis [BR:
pmy03009
]
Prokaryotic type
ribosomal protein modification factors
Pmen_1146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
ABP83913
LinkDB
All DBs
Position
complement(1289550..1291748)
Genome browser
AA seq
732 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTENIRLSQNNIVDPENRYAQIFKIQVELPADISEKDRQGILRSIDRCTVKKVVQQ
GPEFIIEEVDNLDADAQALLMPVSDTTTYIPGKDLPLEQTIANMSGILAELGMKIEIASW
RNIVPNVWSLHIRDAQSNLCFTNGKGATKEAALASALGEFIERLNCNFFYNDQFWGEDIA
GAEFVHYPNERWFKPGPKDALPEEILDEHCRTIFDPDGELRASHLFDTNSGNTARGICSL
PFVRQSDGQTVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILENELCL
PDVPQDVLAKYPGILAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSLEVALERSLTELLQGRSFEGLNDLPQPTFDSLALTEPNNFVEHFIDSSGVVSWRFFS
ARADFEFVEWDFSGEGADSNEQEAATLFGILENMGKEVYVATYDDLGANACRILVPGYSE
IYPVEDLIWDNTNKALLFRKDILNLHALSDRELKSLLRNLNNTEVDDYTDITTLIGIEFD
DNTVWGQLTILELKLLINLALKKYDDAKELVEAFLQYNDNTVERGLFYQAVNAVLEIQLN
DELELADYEHNLRRMFGNERMDAVIGSVEGSVRFHGLTPTSMQLEGLDKHLRLIDSYKKL
HAARARAAGLAG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaacctccgactcgaagccaagttcgatgacttc
acagtggtggccgaccagccgattcgctacaagggcgacggttcggcgccgggaccgttc
gactatttcctggcctcctcggcgctgtgcgcggcgtacttcgtcaagctgtactgccag
acgcgcgacattcccaccgagaatatccgcctgtcgcagaacaacatcgtcgacccggag
aaccgctacgcgcagatcttcaagatccaggtcgaactgccggcggacatttccgagaag
gaccgtcagggcatcctgcgctccatcgaccgctgcacggtgaagaaggtggtgcagcag
ggccccgagttcatcatcgaggaagtcgacaacctcgacgccgatgcccaggcgctgctg
atgccggtgagtgacaccaccacctacatcccgggcaaggacctgccgctggagcagacc
atcgccaacatgtcgggcatcctcgccgagctggggatgaagatcgagatcgcctcctgg
cgcaacatcgtgcccaacgtctggtcgctgcatatccgcgacgcgcagtcgaacctgtgc
ttcaccaacggcaagggcgcgacaaaggaggccgcgctggcttcggccctcggcgagttc
atcgagcggctgaactgcaacttcttctacaacgaccagttctggggcgaggacatcgcg
ggcgccgagttcgtccactaccccaacgagcgctggttcaagccggggccgaaggatgcg
ctgcccgaggaaatcctcgacgagcactgccggaccatcttcgatccggacggcgagctg
cgcgcctcgcacctgttcgacaccaactcgggcaacaccgcgcgcggcatctgctcgctg
ccgttcgtgcgccagagcgatggccagacggtgtacttccccagcaacctgatcgagaac
ctgtacctgtccaacggcatgagcgccggcaacaccctggccgaggcgcaggtgcagtgc
ctgtcggagatcttcgagcgagcggtcaaacgcgagattctggagaacgagctgtgcctg
ccggacgtgccgcaggacgtgctggccaagtacccgggcatcctcgccggcatccagggt
ctggaggaacagggcttcccggtgctggtgaaggatgcctcgctcggcggcgaattcccg
gtgatgtgcgtgaccctgatgaacccgcgtaccggcggcgtgttcgcctccttcggcgcc
cacccgagcctggaagtggcgctggagcgcagccttaccgaactgctccagggccgcagc
ttcgagggcctcaacgatctgccgcagcccaccttcgacagcctggcgctgaccgaaccg
aacaacttcgtcgagcacttcatcgactccagcggcgtggtgtcctggcgcttcttcagt
gccagggccgacttcgaattcgtcgagtgggacttctccggcgaaggggcagactccaac
gagcaggaggccgcgaccctgttcggcatcctcgagaacatgggcaaggaagtctacgtg
gccacctatgacgacctcggcgccaacgcctgccgcatcctggtgccgggctactcggag
atctacccggtcgaggacctgatctgggacaacaccaacaaggcgctgctgtttcgcaag
gacatcctcaacctgcacgccctgagcgaccgcgaactcaagtcgctgctgcgcaacctg
aacaacaccgaggtcgacgactacaccgacatcaccacgctgatcggcatcgagttcgac
gacaacacggtgtggggccagctgaccattctcgagctgaagctcttgatcaacctggcg
ctgaagaaatacgacgacgccaaggagctggtcgaggccttcctgcagtacaacgacaac
accgtcgagcgcggcctgttctaccaggcggtcaacgccgtgctggagatccagttgaac
gacgagctggagctggccgactacgagcacaacctgcggcgcatgttcggcaacgagcgc
atggacgcggtgatcggctcggtggagggcagcgtgcgcttccatggcctgaccccgacc
agcatgcagctcgaaggcctggacaagcacctgcgcctgatcgacagctacaagaaactg
cacgccgcccgcgccagggcggcgggtctggccggctga
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