Ectopseudomonas mendocina ymp: Pmen_1196
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Entry
Pmen_1196 CDS
T00510
Name
(GenBank) regulator of RNA terminal phosphate cyclase
KO
K14414
transcriptional regulatory protein RtcR
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmy03000
]
Pmen_1196
Transcription factors [BR:
pmy03000
]
Prokaryotic type
Other transcription factors
Others
Pmen_1196
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
NACHT
BrxC_BrxD
AAA_30
MCM
AAA_19
ATPase_2
AAA_7
AAA_33
AAA_14
AAA_2
Motif
Other DBs
NCBI-ProteinID:
ABP83961
UniProt:
A4XRJ5
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All DBs
Position
1350012..1351613
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AA seq
533 aa
AA seq
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MRAKKTVAIGFIGATLDRVGKGANRWKKWRPSIGLCQQADLLIDRLELIHGTDARDIGLA
ERIRADIEQISPETEVRLQPMQLRNPWDFEEVYGALHDFTSAYAFDTEHEDYLVHITTGT
HVAQICWFLLTEARYLPARLVQTSPARKRDEAAQVTGTYTLIDLDLSRYDRIATRFKHQR
LEGLAFLKSGIATRNAAFNRSIEQIERVAVRSSAPMLLIGPTGAGKSFLARRVYELKRSR
HLVDGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
LDEQAMLLKAIEEKRFFPLGSDKEVSSDFLLIAGTHRDLRARVAEGLFREDLYARINLWT
FDLPGLAGRREDIEPNIDFELQRHAREQGRLVRFNLEARRRYLAFASSSEAAWQGNFREL
SASITRMATLADSGRIDEAQVQEEIERLRRAWGQQSEHDEVVQLLGEAADALDLFDRLQL
RAVLEVCRQADSLSDAGRRLYQVSRLSKAQPNDADRLRKYLARFGLDWQAVHQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaaagaaaaccgtcgccatcggctttatcggcgccaccctggatcgggtcggc
aagggcgccaatcgctggaaaaaatggcggccgagcatcggcctgtgccagcaggctgat
cttttgatcgaccggctggagttgatccacggcaccgacgcgcgtgatatcggcctggcc
gagcgcatccgcgccgatatcgagcagatatccccggaaaccgaggtgcgcctgcagccg
atgcagttgcgcaacccctgggatttcgaggaggtgtatggtgcgctgcacgatttcacc
agcgcctatgccttcgataccgaacacgaggactatcttgtgcatatcaccaccggtacg
cacgtggcgcagatctgctggttcctgctgaccgaggcgcgctacctgccggcacggctg
gtgcagacctcgccggcgcgcaagcgcgacgaggccgcgcaagtgaccggcacctacacg
ctgattgacctggatctgtcacgctatgaccgtatcgccacgcgcttcaagcaccagcgc
ctggagggtctggccttcctcaagtccggcatcgccacgcgcaacgcggcgttcaaccgg
tccatcgagcagatcgagcgggtcgccgtgcgttcctcggcgcccatgctgctgatcggc
ccgaccggtgccggcaagtcgttcctggcgcggcgcgtatacgagctcaagcgcagccgc
cacttggtcgatggccgcttcgtcgaggtcaactgcgccacgctgcgcggcgatggcgcc
atgtcggcgctgttcggccatatcaagggcgcgttcaccggcgcgcagaatgcccgcgac
ggtctgttgcgtgccgcagatggcggcatgctgtttctcgacgaaatcggcgagctgggc
ctggacgagcaggccatgctgctcaaggccatcgaggaaaaacgcttcttccccctgggt
tctgataaggaggtcagcagcgacttcctactgatcgccggcactcaccgcgacttgcgc
gcacgggtggccgaggggctgttccgcgaagacctctacgcgcggatcaatctctggacc
ttcgatctgcccggcctggccgggcgccgcgaggacatcgagccgaacatcgatttcgag
ctgcagcgccatgcacgggagcaggggcgactggtgcgcttcaatttggaggcgcggcgg
cgttacctggccttcgccagctccagcgaggccgcctggcagggcaacttccgcgaacta
tcggcctcgatcacgcgtatggcgaccctggccgacagcggtcgcatcgacgaggcccag
gtgcaggaggagatcgagcggctgcggcgagcctggggccagcagagcgagcacgacgaa
gtggtgcagctactgggcgaggcggccgatgcgctggatctgttcgaccgcctgcagctg
cgggcggtgctcgaggtctgccgccaggccgacagcctgtccgatgccgggcggcggctg
taccaggtgtcgcgcctgtccaaggcacagcccaacgacgccgatcggttgcgcaagtac
ctggcgcgcttcggcctcgattggcaggccgtgcatcagtag
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