Pseudomonas mendocina ymp: Pmen_1345
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Entry
Pmen_1345 CDS
T00510
Name
(GenBank) glycine dehydrogenase (decarboxylating) alpha subunit
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00260
Glycine, serine and threonine metabolism
pmy00630
Glyoxylate and dicarboxylate metabolism
pmy00785
Lipoic acid metabolism
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
pmy01200
Carbon metabolism
Module
pmy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pmen_1345
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pmen_1345
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Pmen_1345
Enzymes [BR:
pmy01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Pmen_1345
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABP84110
UniProt:
A4XRZ4
LinkDB
All DBs
Position
complement(1504068..1506920)
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AA seq
950 aa
AA seq
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MTKLDTQNEFIARHIGPRDADTAAMLELLGYDSVDALTNAVIPESIKGTSILGEQPGLSE
ADALAKIKAIAAKNLQFKNYIGQGYYGTHTPSPILRNLLENPAWYTAYTPYQPEISQGRL
EALLNFQTLISDLTGMQIANASLLDEATAAAEAMTFCKRLSKNKAANTFFVSQHCHPQTL
DVLRTRAEPLGIDIEVGDEATITDASAYFGALLQYPASNGDIFDYRALVERFHAANALVA
VAADLLALTLLTPPGEFGADVALGSAQRFGVPLGFGGPHAAYFATRDAFKRDMPGRLVGM
SVDRFGKPALRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPKGLTAIAQRV
HSFTAILALGLTKLGHSVEQQHFFDTLSIKTGAKTAELHAKARAAGINLREIDAERLGLS
LDETTDQAAVEALLNLFAADQAAPAVADLAAQVASRLPQGLLRQSAILQHEVFNRYHSET
ELMRYLRKLADKDLALDRSMIPLGSCTMKLNAASEMIPVTWPEFGNLHPFAPVEQAAGYT
QLTTELEAMLCAATGYDAVSLQPNAGSQGEYAGLLAIRAYHLSRGDDQRDICLIPQSAHG
TNPATASMAGMRVVVTACDARGNVDIADLKAKAEEHKDRLAAIMITYPSTHGVFEEGIRE
ICQIIHDNGGQVYIDGANMNAMVGLCAPGQFGGDVSHLNLHKTFCIPHGGGGPGVGPIGV
KSHLAPFLPGHGHMARKEGAVSAAPFGSASILPITWMYITMMGGNGLKRASQMAILNANY
IARRLEEHYPVLYSGEGGLVAHECILDIRPLKDSSGISVDDVAKRLIDFGFHAPTMSFPV
AGTLMIEPTESESKEELDRFCDAMIAIREEIRAVEQGRLDKDDNPLKNAPHTALELVGEW
HHAYSREQAVYPVASLIEAKYWPPVGRVDNVYGDRNLVCACPSIEAYQDA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagctcgatacccagaacgaattcatcgcccgccacatcggcccgcgcgatgcc
gacaccgccgccatgctcgaactgctcggctatgactcggtggacgcgctgaccaatgcc
gtgatccccgagagcatcaagggcaccagcatcctcggcgagcagccgggcctgtcggaa
gccgacgccctggccaagatcaaggccatcgccgcgaagaacctgcagttcaagaactac
atcggccagggttactacggcacgcacacgccgagcccgatcctgcgcaacctgctggaa
aacccggcctggtacaccgcctacaccccgtaccagccggagatttcccagggccgcctg
gaagcgctgctgaacttccagaccctgatcagcgacctcaccggcatgcagatcgccaac
gcatccttgctcgacgaagccaccgctgccgccgaagccatgaccttctgcaagcgtctg
tcgaagaacaaggccgccaacaccttcttcgtttcccagcattgccacccgcagaccctc
gacgtgctgcgcacccgtgccgagccgctgggcatcgatatcgaagtcggcgacgaagcc
accattaccgacgccagcgcctacttcggcgcgctgctgcagtacccggcgagcaacggc
gacatcttcgactaccgcgccctggtcgagcgtttccacgccgccaatgccctggtcgcc
gtagccgccgacctgctggccctgaccctgctcaccccgccgggcgagttcggtgccgac
gtcgccctgggcagcgcccagcgcttcggtgtgccgctgggcttcggtggcccgcacgcc
gcctacttcgccacccgcgacgcgttcaagcgcgacatgccgggccgcctggtgggcatg
tcggtcgaccgtttcggcaagccggccctgcgcctggccatgcagacccgcgagcagcac
atccgccgcgagaaggccaccagtaacatctgtaccgcgcaggtgctgctggccaacatc
gccagcatgtacgccgtgtaccacggcccgaaaggcctgaccgccatcgcgcagcgcgta
cacagcttcaccgccatcctcgccctgggcctgaccaagctgggccacagcgtcgagcag
cagcacttcttcgataccctgagcatcaagaccggcgccaagaccgccgagctgcatgcc
aaggcccgtgctgccggcatcaacctgcgcgagatcgacgccgagcgtctgggtctgtcg
ctggacgaaaccaccgaccaggccgccgtcgaagcgctgctgaacctgtttgccgctgac
caggccgcccctgccgttgccgacctggccgcacaggtcgccagccgcctgccgcaaggc
ctgctgcgccagtcggcgatcctgcagcacgaagtgttcaaccgctaccacagcgaaacc
gagctgatgcgctacctgcgcaagctggccgacaaggacctggccctggaccgcagcatg
atcccgctgggctcctgcaccatgaagctcaacgccgccagcgagatgatcccggtcacc
tggccggagttcggcaacctgcaccccttcgctccggtcgagcaggctgcgggttacacc
cagctgaccactgagctggaagccatgctctgcgccgccaccggctacgacgctgtgtcg
ctgcagcccaacgccggctcccagggcgagtacgcgggcctcttggccatccgtgcctac
cacctgagccgcggcgacgatcagcgcgacatctgcctgatcccgcaatcggcccacggc
accaacccggcgaccgcctccatggccggtatgcgcgtggtggtgaccgcctgtgacgcg
cgcggcaacgtcgacatcgccgatctgaaggccaaggccgaagagcacaaggatcgcctg
gccgcgatcatgatcacctacccgtccacccacggtgtgttcgaggaaggcatccgcgag
atctgccagatcatccacgacaacggcggccaggtgtacatcgacggcgccaacatgaac
gccatggtcggcctgtgcgccccgggccagttcggcggcgacgtctcacacctgaacctg
cacaagaccttctgcatcccgcacggcggcggcggcccgggcgtcggcccgattggcgtc
aagtcgcacctggcgccgttcctgccgggccatggccacatggcacgcaaggaaggtgcg
gtgagcgccgcgccgttcggcagcgccagcatcctgccgatcacctggatgtacatcacc
atgatgggcggcaacggcctcaagcgcgcgtcgcagatggccattctcaacgccaactac
atcgcccgtcgtctggaagagcactacccggtgctgtactccggcgaaggcggcctggtg
gcgcacgagtgtatcctcgacatccgtccgctcaaggacagcagcggcatcagcgtcgac
gacgtggccaagcgcctgatcgacttcggcttccacgccccgaccatgtccttcccggtg
gccggcaccctgatgatcgagccgaccgagagcgagtccaaggaagagctggatcgcttc
tgcgacgccatgatcgccatccgcgaggaaatccgcgcggtcgagcagggccgcctggac
aaggacgacaacccgctgaagaacgccccgcacaccgccctggaactggtcggcgaatgg
caccacgcctacagccgcgagcaggccgtgtacccggtggcgagcctgatcgaggccaag
tactggccgccggtgggccgtgttgacaacgtctacggcgaccgcaacctggtctgcgcc
tgcccgtccatcgaggcgtatcaggacgcgtaa
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