Ectopseudomonas mendocina ymp: Pmen_1381
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Entry
Pmen_1381 CDS
T00510
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pmen_1381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmy03400
]
Pmen_1381
Enzymes [BR:
pmy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pmen_1381
DNA repair and recombination proteins [BR:
pmy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pmen_1381
Prokaryotic type
Pmen_1381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABP84146
UniProt:
A4XS30
LinkDB
All DBs
Position
1546735..1547424
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AA seq
229 aa
AA seq
DB search
MTEDRIKLEASWKHALREEFDKPYMKELREFLRAEKAAGKEIYPPGPLIFNALNSTPLDQ
VKVVIIGQDPYHGPGQAHGLCFSVQPGVQTPPSLVNIYKELKRDLNLDIPAHGYLQSWAD
QGVLLLNTSLTVERGNAGSHAAKGWQPFTDRVIEVVSEHQPKVVFLLWGSHAQSKQRLID
PTKHLVLRSPHPSPLSAHRGFIGNGHFSRCNQFLAQNGMSPIDWRLPAL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagatcgcatcaagctcgaagccagctggaaacacgcgctgcgcgaggagttc
gacaagccctacatgaaggagctgcgcgagttcctgcgggcggagaaggccgccggcaag
gagatctatccgccgggcccgctgatcttcaacgccctcaattccacgccgctggaccag
gtcaaggtggtgatcatcggccaggacccataccacgggccgggtcaggcgcacgggttg
tgcttctcggtgcagccgggcgtgcagacgccgccgtcgctggtgaacatctacaaggaa
ctcaagcgcgacctcaatctcgacatccccgcgcacggctacctgcagagctgggccgat
cagggcgtgctgctgctcaacacctcgctgacggtggagcgcggcaatgccggctcgcac
gcggccaagggctggcagccgttcaccgaccgggtgatcgaggtggtcagcgagcatcag
cccaaggtggtgttcctgctctggggcagccacgcgcagagcaagcagcgtctgatcgac
ccgaccaagcatctggtgctgcgttcgccgcatccatcgccgctgtccgcccatcgcggt
ttcatcggcaacggtcatttcagccgctgcaaccagttcctcgcacagaacggcatgagc
cccatcgactggcgtctgccggcgctatag
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