Ectopseudomonas mendocina ymp: Pmen_1485
Help
Entry
Pmen_1485 CDS
T00510
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmy03021
]
Pmen_1485
Transcription machinery [BR:
pmy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pmen_1485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
PRKG1_interact
Motif
Other DBs
NCBI-ProteinID:
ABP84250
UniProt:
A4XSD4
LinkDB
All DBs
Position
complement(1644659..1647502)
Genome browser
AA seq
947 aa
AA seq
DB search
MAQYQPGQRWISDSEAELGLGTILAEDGRLLTVLYPATGETRQYATRNAPLTRVRFAPGD
EITHFEGWKLTVQEVEDVDGLLVYHGLDAQHKPVTMPETQLSNFIQFRLASDRLFAGQID
PLAWFALRYHSLEHNSRLLQSSLWGLGGARAQPIAHQLHIAREVADRIAPRVLLADEVGL
GKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLDVALFDAERFMESDAS
NPFEDCQLALVALEWLKDDEKAQDALFAAGWDLLVVDEAHHLVWHPEQASPEYSLVEQLA
EVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESSQYRPVAEAVQELLDQG
KLSAQARDAIGGFLGDEGRELLDAVDSGDDDARARLVRELLDRHGTGRLLFRNTRAAVQG
FPERELHPYPLPSPDEYLELPVGEHAELYPEVSYQAQEEIDDEQRWWRIDPRVEWLIDTL
KMLKKFKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGAQ
VLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHRIQLHVPYLENSPQ
ERLFQWYHQALNAFLATCPTGNALQHQFGPRLLPLLESGDDGQWQQLVDEATAERIRLEG
ELHSGRDRLLELNSGGAGEGEALVEAILEQDDQFTLPIYMEELFNAFGIDSEDHSDNALI
LRPSEKMLDASFPLGDDEAVTVTYDREQALAREDMQFLTWEHPMVQGGMDLVLSGSMGNT
AVALIKNKALKPGTVLLELLYVSEVVGPRKLQLGRFLPPAALRCLLDANGNDLAPKVGFE
TLNDQLESVPRASANKFVQAQRDVLAKQINDAEAKVMPRHVERVAEAKRRLIAELDEELA
RLIALRAVNPSVRDSEIDALREQREQSLAMFDKAALRLEAIRVLVAG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtatcaaccggggcaacgctggatcagtgacagcgaagcggaattgggtctg
ggaaccatcctcgccgaggacggccgcctgctcaccgtgctctacccggccaccggcgaa
acccgccagtacgccacgcgcaatgccccgctgacccgtgtgcgcttcgccccgggtgac
gagatcacccatttcgagggctggaagctcaccgtgcaggaggtcgaggatgtcgacggc
ctgctggtctaccacggcctcgatgcccagcataaaccggtgaccatgccggaaacccag
ctgtcgaacttcatccagttccgcctggccagcgaccgcctgttcgccggccagatcgac
ccgctggcctggttcgccctgcgttatcacagtctcgagcataacagccgcctgctgcag
tcgtccctctggggcctgggtggtgcgcgcgcccagccgatcgcccaccagctgcacatc
gcccgcgaagtggccgaccgcatcgcaccgcgcgtgctgctggccgacgaagtaggtctg
ggcaagaccatcgaagccggcctggtgatccatcgccagctgctctccggccgcgccagc
cgcgtgctgatcctggtgccggaaaacctgcagcaccagtggctggtggaaatgcgccgg
cgtttcaacctcgacgtcgccctgttcgacgccgagcgtttcatggaaagcgacgccagc
aacccctttgaggattgccagctggcgctggtcgccctggagtggctgaaggacgacgaa
aaggcgcaggacgcgctgttcgccgccggctgggacctgctggtggtcgacgaagcccac
cacctggtctggcacccggagcaggccagccccgaatactcgctggtcgaacaactggcc
gaggtcatccccggcgtgctgctgctcaccgccaccccggaacagctcggccaggacagc
cacttcgcccgtctgcgcctgctcgatcccaatcgtttccatgatctgcaagccttccgc
gccgagagcagccagtaccgcccggtggccgaagcggtgcaggagctgctcgaccagggc
aagctcagcgcccaggcacgcgatgccatcggcggcttccttggcgatgaaggccgtgag
ctgctcgacgccgtcgacagcggcgatgacgacgcccgcgcccgcctggtgcgcgaactg
ctggatcgccacggcaccggccgtctgctgttccgcaacacccgcgccgccgtgcagggc
ttccccgagcgcgagctgcacccctacccgctgccgagcccggacgaatacctcgagctg
ccggttggcgagcacgccgagctgtacccggaagtcagctatcaggcgcaggaagagatc
gacgacgagcaacgctggtggcgcatcgacccgcgcgtcgagtggctgatcgacaccctg
aagatgctcaagaaattcaaggtgctggtgatctgcgcccatgccgagaccgcgctggat
ctggaagacgccctgcgcgtgcgttccggcatccccgccacggtgttccatgaaggcatg
agcatcctcgagcgcgaccgcgcggcggcctatttcgccgatgaggaattcggcgcccag
gtgctgatctgctcggaaatcggctccgaaggccgcaacttccagttcgcccatcatctg
gtgctgttcgacctgccggcccacccggacctgctcgagcagcgtatcggccgtctcgac
cgtatcggccagaagcaccgcatccagctgcacgtgccgtacctggagaacagcccgcag
gagcgcctgttccagtggtaccaccaggcgctgaacgccttcctcgccacctgccccacc
ggcaacgccctgcagcaccagttcggcccacgcctgctgccgctgctggaaagcggcgac
gacggccagtggcagcaactggtggacgaagccaccgccgagcgcattcgcctggaaggc
gaactgcacagcggccgcgaccgcctgctggagctgaattccggcggcgccggcgaaggt
gaggcgctggtcgaggcgatcctcgagcaggacgaccagttcaccctgccgatctacatg
gaagagctgttcaacgccttcggcatcgacagcgaagaccactccgacaacgccctgatc
ctgcgccccagcgagaagatgctcgatgccagcttcccgctgggcgacgacgaagcggtg
accgtcacctacgaccgcgagcaggctctggcccgcgaggacatgcagttcctcacctgg
gaacaccccatggtgcagggcggcatggacctggtgctgtccggctcgatgggcaacacc
gcggtggcgctgatcaagaacaaggcgctcaaacccggtaccgtgctgctggagctgctt
tacgtcagcgaagtggtcggcccacgcaagctgcagctgggccgcttccttccaccggct
gcgctgcgttgcctgctcgacgccaatggcaacgacctggcgccgaaggtcggtttcgag
acgctcaacgatcagctcgaaagcgtgccacgggccagcgccaacaagttcgtccaggct
cagcgcgatgtgctggccaagcagatcaatgacgccgaagccaaggtcatgccgcgccat
gtcgagcgcgtggccgaggccaagcgccgcctgatcgccgaactggacgaggaactggcc
cgtctgatcgccctgcgcgcggtcaacccgagcgtacgcgacagcgagatcgacgccctg
cgcgagcagcgcgaacagagcctggcgatgttcgacaaggccgccctgcgcctggaagcg
attcgcgtattggtcgcgggctaa
DBGET
integrated database retrieval system
