Ectopseudomonas mendocina ymp: Pmen_1495
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Entry
Pmen_1495 CDS
T00510
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00061
Fatty acid biosynthesis
pmy00071
Fatty acid degradation
pmy01100
Metabolic pathways
pmy01212
Fatty acid metabolism
pmy02024
Quorum sensing
pmy04146
Peroxisome
Module
pmy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pmen_1495
00071 Fatty acid degradation
Pmen_1495
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pmen_1495
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pmen_1495
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmy01004
]
Pmen_1495
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmy04147
]
Pmen_1495
Enzymes [BR:
pmy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pmen_1495
Lipid biosynthesis proteins [BR:
pmy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pmen_1495
Exosome [BR:
pmy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pmen_1495
Exosomal proteins of breast cancer cells
Pmen_1495
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABP84260
LinkDB
All DBs
Position
1654172..1655860
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AA seq
562 aa
AA seq
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MQPDFWNDKRAPGVPNEIDLSSYKSVIEVFERSCKRFADRPAFSNLGVTLSYAELDRLSA
AFAAYLQKHTDLKPGDRIAVQMPNVLQYPIAVFGAMRAGLIVVNTNPLYTAREMRHQFKD
AGVRALVYLNMFGKLVQEVLPDTEIEYLIEAKMGDMLPSLKGWLVNTVVKKVKKMVPDYH
LPQAIAFKQVLKQGHGQALTPVKASHDDIAVLQYTGGTTGVAKGAMLTHGNLVANMLQVD
ACLAQLGDDGKPLMKQGQEIMIAPLPLYHIYAFTANCMCMMVNGNHNVLITNPRDIPGFV
KELGKWKFSALLGLNTLFVALMDHPEFKNLDFSNLKVTNSGGTALVKATAERWQQMTGCT
VVEGYGLTETSPVASTNPYGNRARLGTVGIPVPSTAFKVIDDDGNELPLGERGELCIKGP
QVMKGYWQRPEATAEVLDAEGWFKTGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVASCAAIGVPDEKSGEVVKLFVVPRDGGVTIEELKAYCKENFTGYKVPKHIV
LKDALPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaacgataaacgcgcgcccggtgtacccaacgagatcgacctg
tccagctacaagtcggtgatcgaggtgttcgagcgttcgtgcaagcgtttcgccgaccgc
ccggcgttcagcaacctgggtgtaaccctgagctacgccgagctggatcgcctctcggcg
gccttcgcggcctatctgcagaagcacaccgacctcaagccgggcgaccgtatcgcggta
cagatgcccaacgtgctgcagtatcccatcgccgtgttcggcgccatgcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcccgcgagatgcgtcaccagttcaaggac
gctggtgtgcgtgcactggtgtacctgaacatgttcggcaagctggtgcaggaggtactg
ccggataccgagattgagtacctgatcgaagccaagatgggcgacatgctgcccagtctc
aagggctggctggtcaacaccgtggtgaagaaggtcaagaagatggtgcccgactaccat
ctgccccaggccatcgccttcaagcaggtgctcaagcagggccatggccaggcgctgacg
ccggtcaaggccagtcacgacgatatcgccgtgctgcagtacaccggcggcaccaccggt
gtggccaagggcgccatgctgactcacggcaacctggtggccaacatgctgcaggtcgac
gcctgcctggcgcagctcggtgacgacggcaagccgctgatgaagcagggccaggagatc
atgatcgcgccgctgccgctgtaccacatctatgccttcaccgcgaactgcatgtgcatg
atggtcaacggcaaccacaacgtgttgatcaccaatccgcgcgacattccgggtttcgtc
aaggaactgggcaagtggaagttctccgcgctgctgggtttgaacaccctgttcgtcgcg
ctgatggatcatccggagttcaagaatctcgatttctccaatctcaaggtgaccaactcc
ggcggcaccgccctggtcaaggccaccgccgagcgctggcagcagatgaccggttgcacc
gtggtggaaggctacggcctgaccgaaacctcgccggtggccagcaccaacccctacggc
aacagggcgcgcctgggcaccgtgggcattccggtgccgagcacggcgttcaaggtgatc
gacgacgatggcaacgagctgccgctgggcgagcggggcgagctgtgcatcaaggggccg
caggtgatgaagggctactggcagcgtccggaggccaccgctgaggtgctcgacgccgag
ggctggttcaagaccggcgacatcgcggtgatcgaccccgacggcttcgtgcgtatcgtc
gatcgcaagaaggacatgatcatcgtctccggcttcaacgtgtacccgaacgagatcgag
gacgtggtcatggcccacccgaaagtcgccagctgcgcggccatcggcgtgccggacgag
aaatccggcgaggtggtcaagctgtttgtggtaccgcgtgacggcggcgtgaccattgaa
gagctcaaggcctactgcaaggagaacttcaccggctacaaggttcccaagcacatcgtc
ctgaaggacgccttgccgatgaccccggtcggcaagatcctgcgccgcgagctgcgcgac
atcgcctga
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