Ectopseudomonas mendocina ymp: Pmen_1580
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Entry
Pmen_1580 CDS
T00510
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00071
Fatty acid degradation
pmy00280
Valine, leucine and isoleucine degradation
pmy00310
Lysine degradation
pmy00362
Benzoate degradation
pmy00380
Tryptophan metabolism
pmy00410
beta-Alanine metabolism
pmy00640
Propanoate metabolism
pmy00650
Butanoate metabolism
pmy00907
Pinene, camphor and geraniol degradation
pmy00930
Caprolactam degradation
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
pmy01120
Microbial metabolism in diverse environments
pmy01200
Carbon metabolism
pmy01212
Fatty acid metabolism
Module
pmy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Pmen_1580
00650 Butanoate metabolism
Pmen_1580
09103 Lipid metabolism
00071 Fatty acid degradation
Pmen_1580
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Pmen_1580
00310 Lysine degradation
Pmen_1580
00380 Tryptophan metabolism
Pmen_1580
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Pmen_1580
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Pmen_1580
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pmen_1580
00930 Caprolactam degradation
Pmen_1580
Enzymes [BR:
pmy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Pmen_1580
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Pmen_1580
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Pmen_1580
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Pmen_1580
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABP84344
UniProt:
A4XSM8
LinkDB
All DBs
Position
1742502..1744649
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRASVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLAVPTVVAINGIALGGGFE
MCLAGDYRVMSETAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIASGKENKAADAL
KVGAVDAVVAPAKLKEAALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLTEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEDVVR
EDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVSDPEAYELLKSIVVEEREVTDEDIINFMMIPLCLETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaaattcaaccgtcttaccctcaacgagctg
cgcgcctccgtcgacgcgatcaaggccgacggttcgatcaagggcgtgattgtcaccagt
ggcaaggacgtgttcatcgtcggtgccgatatcaccgaattcgtcgacaacttcaaactg
cccgacgaagagctggtggctggcaacctggaagccaacaagatcttcagtgatttcgaa
gacctcgccgtgcccaccgtcgtcgccatcaacggcatcgccctgggtggcggtttcgag
atgtgcctggccggtgactaccgcgtaatgagcgagaccgccaagatcggtctgccggaa
gtcaaactgggcatctacccgggcttcggcggcaccgtgcgcctgcctcgcgtgatcggc
accgacaacgctgtcgagtggatcgcctccggtaaggaaaacaaggctgccgacgccctc
aaggtaggcgccgtcgatgccgtcgtcgcccccgccaagctcaaggaagccgcgctggat
ctggtcaagcgcgccatctccggcgagctggactacaaggccaagcgtcagcccaagctg
gaaaagctcaagctcaacgccatcgagcagatgatgtgcttcgagaccgccaagggcttc
gttgctggccaggccggcccgaactacccggctccggtcgaggcgatcaagaccattcag
aaagccgccaacttcggccgcgacaaggcgctggaagtcgaggccgccggcttcgtcaaa
ctggccaagacctcggtcgccgagagcctgatcggcctgttcctcaacgatcaggaactg
aagaagaaggccaaacaccacgacgaaatcgcccgcgacgtgaaactggctgccgtactc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggcctccaagggcaccccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggcctgaccgaggcctccaagctg
ctcggcaagcgcgtcgagaaaggtcgcatgaccccggcgaagatggctgaagccctcaat
gccatccgtccgaccatgtcctacggtgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggttgagaaccccaaggtcaagcagatcgtgctggccgaagtggaagacgtggtgcgc
gaagacgccatcctggcctccaacacctcgaccatctccatctccctgctggcccaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcattcgtggcgagaagtccagcgaagtggccgtggccaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aaccgcgtgctgttcccgtacttcggtggcttctccaagctgctgggcttcggtgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatgggcccggcctacctc
tccgacgtggtcggcatcgacaccggccaccacggccgtgacgtgatggccgaaggcttc
ccggaccgcatggcggtggaaggcaagaccgctgtcgacgtgatgtacgaagccaatcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaggtctccgaccctgaagcttacgagctgctcaagtccatcgtggtcgaagagcgt
gaagtcaccgacgaggacatcatcaacttcatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgataccgcagccgaggccgatatgggcctgatctac
ggcatcggcttccctcccttccgtggcggtgcgctgcgctacatcgattccatcggtgtc
gccgagttcgtcgccctggccgacaagtacgccgacctgggcgcgctgtaccacccgacc
gccaagcttcgcgaaatggccgccaagggccagaagttcttcggttaa
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