Ectopseudomonas mendocina ymp: Pmen_1620
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Entry
Pmen_1620 CDS
T00510
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmy03009
]
Pmen_1620
Enzymes [BR:
pmy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Pmen_1620
Ribosome biogenesis [BR:
pmy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pmen_1620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
RedAm-like_C
Motif
Other DBs
NCBI-ProteinID:
ABP84384
UniProt:
A4XSR8
LinkDB
All DBs
Position
1785405..1786403
Genome browser
AA seq
332 aa
AA seq
DB search
MIKCFNSIKNCYDCAMTTPASPTSGVQLIEVAPDFAGQRIDNFLRTQLKGVPKTLIYRIL
RKGEVRVNKGRIKPEYKLQAGDIVRVPPLRLAERDEPEPVAQGLLERLEAAIVYEDKALI
VLNKPAGIAVHGGSGLNYGVIEAFRQLRPDAKDLELVHRLDRDTSGLLMIAKKRSMLRHL
HEALRGDGVDKRYMALVRGHWATAKKQVNAPLQKSNLRSGERMVEVDGEGKEALTLFRVL
RRFGDFATLVEAKPVTGRTHQIRVHAKHAGHCIAGDSKYGDDDFTREIRELGGKRLFLHA
YELHVPLPEGGVLKLEAPVDDMWAKTLERLSA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgcttcaattccataaaaaattgttatgattgcgcgatgactactcccgcc
tctccaacctccggcgttcagctgatcgaggttgcaccggatttcgccggccaacgcatc
gacaatttcctcaggacacagctcaagggcgtgcccaagaccctgatttaccgcattctg
cgcaaaggcgaggtgcgggtgaacaagggtcggatcaagcccgagtacaagctgcaggct
ggtgacatcgtgcgcgtgccgccgttgcgcctggccgagcgcgacgagcccgagccggtc
gcccaggggctgctcgagcggctcgaggcggccatcgtctacgaagacaaggcactgatc
gtgctgaacaagccggccggcattgccgtgcacggcggcagcggcctgaattacggggtg
atcgaggccttccgtcagttgcgtcccgatgccaaggatctggagctggtgcaccgcctg
gatcgcgacacgtccggacttttgatgatcgccaagaagcgcagcatgctgcgtcacctg
cacgaggcattgcgcggcgacggcgtggacaaacgctacatggcgctggttcgcggccac
tgggcgaccgccaagaagcaggtcaacgcgccgctgcagaagagcaacctgcgctccggc
gagcgcatggtcgaagtcgacggcgagggcaaggaggcgctgacgctgttccgcgtgctg
cgccgcttcggcgacttcgccacgctggtcgaggccaagccggtgaccggccgcactcat
cagattcgcgtgcacgccaagcatgccgggcactgcatcgctggtgactccaaatacggt
gatgacgactttacccgcgagattcgcgagctgggcggcaagcgcctgttcctgcatgcc
tacgaattgcatgtgccgctgcctgagggcggtgtgctgaagctcgaggcgccggtggat
gacatgtgggccaagaccctggagaggctgagtgcctga
DBGET
integrated database retrieval system
