Ectopseudomonas mendocina ymp: Pmen_1650
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Entry
Pmen_1650 CDS
T00510
Name
(GenBank) transcriptional regulator, AraC family
KO
K07506
AraC family transcriptional regulator
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmy03000
]
Pmen_1650
Transcription factors [BR:
pmy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Pmen_1650
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cupin_6
AraC_binding_2
AraC_binding
DUF4143
Motif
Other DBs
NCBI-ProteinID:
ABP84414
UniProt:
A4XSU8
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Position
complement(1812089..1813039)
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AA seq
316 aa
AA seq
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MEALLVSQSEPVASTDALRIPAEAMWQYLPDGRPAPPQPPAAQDVVLHLFTHRSIAEPIL
VPAVAEPLLVMVLAGSAIVEERVAGGEWEQTEVRVGDFFLTSTTQPYEMRWQTRAGDSFE
VMHLYLAPTLIDRAAHDLGLQQAGTVSFVDVSGGRDDWVRMLLEQLRTELTGSRTPSQLL
VHSLAQALAIHLVRTYRAPPATGRRSNALQAYKLRRVVDLMNQHLAQDFSLSSLAQAAQL
SEYHFSRLFKRATGLSPSRYFIRLRMARARQLLLETDHSVIDIGLEVGYSSASHFSQVFR
REVGITPSAYRDPGRD
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttgctggtgagccaatccgaacctgtcgcctctactgacgccctgcggatt
ccggccgaggccatgtggcaatacctgccggatggccgcccggcaccgccccagccgcct
gccgcgcaggacgtggtgctgcacctgttcacgcaccgcagcatcgccgagccgattctc
gtgccggcggtggccgaaccgctgctggtgatggtgctggcagggtcggccatcgtcgaa
gaacgcgtggcgggcggcgaatgggagcaaaccgaggtgcgcgttggcgacttcttcctc
accagcaccacacaaccctatgaaatgcgctggcaaaccagagcgggcgacagcttcgaa
gtgatgcatctgtatctcgcgcctacgctgatcgaccgcgccgcgcacgacctggggctg
caacaggccgggacggtaagcttcgtcgacgtttccggtggccgtgacgactgggtacgc
atgctgctcgaacagttgcgtacggagctcaccggcagccgcacgccgagtcagctactc
gtgcacagcctggcccaggcgctggcgattcatctggtgcgaacctatcgcgccccaccg
gccacaggcagacgcagcaacgccctgcaggcctacaaactgaggcgcgtcgtcgacctg
atgaaccagcatctggcgcaagacttttccctgtccagcctcgcgcaagccgcacaactg
agcgaataccacttcagccggctgttcaaacgcgccaccgggctgtcgccgtcgcgctac
ttcattcgcctgcgcatggcacgcgctcgacaactgctgctggaaaccgaccacagcgtg
atcgatatcgggctggaggtgggctactcgagcgccagccatttttcgcaggtctttcgc
cgcgaagtgggcataacgccgagcgcctaccgcgatccggggcgggattga
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