Ectopseudomonas mendocina ymp: Pmen_1878
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Entry
Pmen_1878 CDS
T00510
Name
(GenBank) polysaccharide biosynthesis protein CapD
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00541
Biosynthesis of various nucleotide sugars
pmy00552
Teichoic acid biosynthesis
pmy01100
Metabolic pathways
pmy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Pmen_1878
00552 Teichoic acid biosynthesis
Pmen_1878
Enzymes [BR:
pmy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
Pmen_1878
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding_3
adh_short
KR
ThiF
wHTH_TTC3
Motif
Other DBs
NCBI-ProteinID:
ABP84641
UniProt:
A4XTH5
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Position
2069808..2071676
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AA seq
622 aa
AA seq
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MGAWDAARPFSGHGWLFLLAPVIALPIFIRLGMYRAVMRYLGNDALVAIAKAVTLSALVL
SLAVYWYRGPTALVPRSMVFNYWWLSLLLLGGLRLTMRQFFIGDWFGPIARRRDIESGTS
KVAIYGAGAAGNQLVAALRLGKAMRPAAFIDDDSGIATRMIAGLRVYTPKHIQQMIDETG
VTEVLLAMPSIPRARRREILEALEPYALHVRSIPGFMDLASGRVKVEDLQEVDIADLLGR
DAVPPRQDLFERCIKNQVVLVTGAGGSIGSELCRQILASGAQTLLLFEHSEFNLYSIHGE
LQQRIERESLPITLMPILGSIRNFERLFDILQTWRVNTVYHAAAYKHVPMVEHNVAEGVL
NNLVGTLNAAQASIKAGVANFVLISTDKAVRPTNVMGSTKRLAEMVLQALSREAAPLLFG
QDQGVHQVNKTRFTMVRFGNVLGSSGSVIPLFREQIKQGGPVTVTHPNITRYFMTIPEAA
QLVIQAGSLGQGGDVFVLDMGEPVKIADLAEKMIRLSGLSVRDERNPHGDIAIEFTGLRP
GEKLYEELLIGEDVKPTEHPMIMRAEEDMLPWEELKTRLKALLVAVNEDDYARVRVLLRE
TVHGYVPEGEIVDWIHLRNREG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggggcttgggatgctgccagacctttttctggtcatggctggttgtttctactggcg
cctgttattgcacttcccattttcatcaggctggggatgtatcgtgcggtaatgcgttat
ttgggtaatgatgctcttgtagcgatagccaaggcagtgaccttatctgcattggtgcta
tctctggctgtctattggtatcgcgggccgacggctctcgttccgaggtccatggttttt
aattattggtggctgagcctgctgctgttgggcggtttgcgcttgaccatgcgccagttc
tttataggtgattggttcgggccgattgctcgccgccgcgatatcgagtcaggcacttcc
aaggtcgccatatatggggccggggcggctggtaatcagctggtagcagctttgcgtttg
ggtaaagcgatgcgtccggcggcattcattgatgatgattccggtattgctactcgcatg
attgcggggctgcgcgtctacacgcccaagcatattcagcaaatgatcgatgaaacgggt
gtgacagaggttttgctggcaatgccctcgatcccccgcgcgcgcaggcgggagatactc
gaggcgttggagccttacgcgcttcatgtgcgcagcatccccgggtttatggatctcgct
agtgggcgggtaaaggtcgaagaccttcaggaagtcgatatcgccgatcttctcgggcgt
gacgccgtaccacctcgccaggatttgttcgagcgctgcatcaagaatcaggtcgtcctg
gtaaccggtgctggcggctccatcggttcggagctgtgtcggcagattctcgccagtggc
gcgcaaaccttgctgcttttcgagcatagcgagttcaatctttacagtatccacggcgag
ttgcagcagcgtatcgagcgagagtcgctgcctataacgctgatgccgattttgggatct
atccgtaatttcgagcgcttgttcgatatcttgcagacctggcgcgtcaacactgtctat
cacgctgcggcttacaagcacgtgccgatggtcgagcacaacgttgccgagggggttctc
aacaacctggtcgggacgctcaatgcggcgcaggcttcgatcaaggcgggtgtggccaac
ttcgttctgatctcgactgacaaggcggtacggcctaccaatgtcatgggtagcaccaag
cgtctggctgagatggtcctgcaggcactgagccgtgaggctgcgccgctgctgttcggc
caagatcaaggggttcatcaggtaaacaagacgcgttttaccatggtccgcttcggtaat
gttctgggttcttctggatccgttattccgctgttcagagagcagatcaagcagggtggg
ccggtgacggtgactcatccgaacatcacccgctatttcatgacgatccctgaggcggca
cagctcgtcattcaggccggctcgttggggcagggtggcgatgtgttcgtgctggatatg
ggtgagccggtgaagattgccgatctcgcggagaagatgattcgtctgtctggcttgtcg
gtgcgcgatgagcgcaacccgcatggcgatattgccatcgagttcactggcctgcgtcct
ggcgagaagctctacgaggagctgctgattggtgaggatgttaagccgaccgagcatccg
atgatcatgcgcgcggaagaggacatgttgccttgggaggaactcaagactcgtttgaag
gcgttgctggttgcggtcaacgaggatgactatgcccgcgttcgcgtgctattgcgcgag
accgtgcatgggtatgtacccgagggagaaatcgtcgactggattcatctgagaaatcgc
gaaggttga
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