Ectopseudomonas mendocina ymp: Pmen_1981
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Entry
Pmen_1981 CDS
T00510
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Pmen_1981
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmy01007
]
Pmen_1981
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmy03016
]
Pmen_1981
Enzymes [BR:
pmy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Pmen_1981
Amino acid related enzymes [BR:
pmy01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Pmen_1981
Transfer RNA biogenesis [BR:
pmy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Pmen_1981
Prokaryotic type
Pmen_1981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ABP84742
UniProt:
A4XTS6
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All DBs
Position
2179678..2182056
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AA seq
792 aa
AA seq
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MKFSEQWLRSWVNPDVSRDELVARLSMVGLEVDAVIPVAGAFSGVVVGEILSAEQHPDAD
KLRVCQVSNGSESFQVVCGAPNARAGIKIPFAMIGAELPGDFKIKKAKLRGVESQGMLCS
ASELQISDDNSGLMELAADAPVGQDIRAYLGLDDASIEIGLTPNRGDCLSLAGLAREVGA
IYGSPVLAVSVAPVAAIHDEVRPVEVLAPKACPRYLGRVIRKVDLSRPTPLWMVERLRRS
DIRSIDAAVDVTNYVMLELGQPMHAFDLAEINGGVRVRMAEEGEKLVLLDGQEVSLRADT
LVIADHSRALAIAGVMGGEHSGVSDKTRDLFLESAFFDNIAVAGKARSYGLHTDSSHRFE
RGVDSQLARSAMERATALLLEIVGGEAGPIIEVSSEADLPNVAPITLRAERISQMLSMDM
DGAEVERLLSALGLGVIAQGAGQWQVSVPSHRFDISLEVDLIEELGRLYGYNRLPVRYPQ
ARLAPQAKAEARAELPALRRLLVARGYQEAITYSFIDPKLFELFSPGVAPLQLANPISAD
MAAMRSSLWPGLVKALQHNVNRQQSRVRLFESGLRFVGQLESLQQEAMLAGVISGSRLPE
GWANSRESVDFYDLKADVEALLGYAGAADAFSFVPGEHPALHPGQTARIEREGRLVGFMG
ALHPELSKTLGLDQPVFLFELVLAEVAAGRMPVFSELSRFPEVRRDLALLVDREQPAEAV
LAAIRETAGEWLTDLKLFDVYHGKGIDPHRKSLAVGLTWQHPSRTLNDDEVSTTTQNILT
CLEQRFNATLRK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaacagtggctgcgcagctgggtgaacccggacgtctcgcgcgacgag
ctggtggcccgcctgtcgatggtcggcctggaagtggacgccgtgattccggtggctggc
gctttcagcggcgtggtggtcggcgagatcctcagcgccgagcagcacccggatgccgac
aagctgcgcgtgtgtcaggtgagcaatggtagcgagagcttccaagtcgtctgcggcgcg
ccgaatgcacgtgccggcatcaagatccccttcgccatgatcggcgccgagctgccgggc
gacttcaagatcaagaaggccaagctgcgcggtgtggagtcccagggcatgctgtgctcg
gcctccgaactgcagatcagcgacgacaacagcggcctgatggagctggcggcggacgcc
ccggtcggtcaggacatccgcgcctacctgggcctggacgatgccagcatcgagatcggt
ctgactcccaaccgcggcgactgcctgtcgctggcgggtctggctcgtgaagtcggtgcc
atctacggttctccagtattggcggtatcggttgctccggtcgcagcgatccatgacgaa
gtgcgcccggtggaagtgctggcgcccaaggcttgcccgcgctacctgggccgcgtcatc
cgcaaagtcgacctgtccaggccaactccgttgtggatggtcgagcgcctgcgccgttcc
gacattcgcagcatcgacgcggctgtcgacgttaccaactacgtgatgctcgagttgggc
cagcccatgcacgccttcgacctagccgagatcaacggcggcgtccgcgtgcgcatggcc
gaagagggcgagaagctggtgctgctcgatggccaggaagtcagcctgcgtgctgacacc
ctggtgatcgccgatcacagccgcgccctggcgattgccggcgtgatgggcggcgagcac
agcggcgtcagtgacaagacccgcgatctgttcctggaaagcgccttcttcgacaacatt
gccgtggctggtaaggcgcgctcctatggcctgcacaccgactcgtcgcaccgtttcgag
cgtggcgtcgattcgcagctggcgcgcagcgccatggagcgtgccaccgcgctgctgttg
gaaatcgtcggcggcgaagctgggccgatcatcgaggtcagcagcgaggccgatctgcca
aacgtggcgccgatcaccctgcgtgccgagcgcatcagtcagatgctgagcatggacatg
gacggtgccgaggtcgagcgtctgctcagcgcgctgggtctgggcgtgatcgcccagggc
gccggccagtggcaggtcagcgtgccgagccaccgcttcgatatcagcctggaagttgac
ctgatcgaagagctgggtcgcctgtacggttacaaccgcctgccggtgcgctacccgcag
gcgcgtctggcaccgcaggccaaggccgaggcacgtgccgaactgccggccctgcgtcgc
ctgctggtggcgcgcggttaccaggaagcaatcacctacagcttcatcgatcccaagctg
ttcgagctgttcagtccgggcgtggcgccgctgcaattggccaacccgatttccgccgac
atggcggccatgcgttcgtcgctgtggccgggcctggtcaaggcgctgcagcacaacgtc
aaccgtcagcagtcgcgcgtgcgcctgttcgaaagtggactgcgcttcgtcggtcagcta
gaaagcctgcagcaggaggccatgttggccggcgtgatcagtggcagtcgtctgccggaa
ggctgggccaacagccgcgagagcgttgacttctatgacctgaaggccgatgtcgaagct
ctgctgggttatgccggcgcggccgatgcgttcagcttcgtgccgggtgagcatcctgct
ctgcatccgggccagaccgcccgtatcgagcgggaggggcgcctggtcggtttcatgggc
gcactgcatccggagctgagcaagactctgggtctggatcagccagtgttcctattcgag
ctggtgctggccgaagttgctgctggtcgtatgccggtgttcagcgagctgtcgcgcttc
cccgaagtgcgtcgcgatctggcactgctggtggatcgcgagcagccggccgaggccgta
ttggctgccattcgtgaaacggcgggcgagtggttgacagacctcaagctatttgacgtc
tatcacggtaaaggtattgatccgcatagaaaaagcctggctgtcggcttgacctggcaa
catccatcgcgcactcttaatgacgatgaggtgagtactactacgcaaaacatcctcacc
tgcctcgaacaaaggttcaacgccacgttaaggaagtag
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