Ectopseudomonas mendocina ymp: Pmen_2068
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Entry
Pmen_2068 CDS
T00510
Name
(GenBank) Lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00330
Arginine and proline metabolism
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Pmen_2068
Enzymes [BR:
pmy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Pmen_2068
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABP84829
UniProt:
A4XU13
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All DBs
Position
2289642..2291885
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AA seq
747 aa
AA seq
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MYKDLKFPVLIVHRDIKADTVAGDRVRAIARELEQDGFSILPTASAAEGRIVASTHHGLA
CILVAAEGAGENSRLLQDMVELIRVARVRAPQLPIFALGEQVTIENAPAEAMADLNHLRG
ILYLYEDTVSFLARQVARAAHNYLDGLLPPFFKALVQHTAQSNYSWHTPGHGGGVAYRKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHSMVGRDDLVLVDRNCHKSILHSIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIDASPLARGRAPKVKLAVVTNSTYDGLCYNAEMVKQALGDSVEVLHFDEAWYA
YAAFHEFYAGRYGMGTQCDERSPLVFTTHSTHKLLAAFSQASMIHVQDGGQRQLDRDRFN
EAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALANVRRNLDAED
WWFSIWQPGEADGADSLSTADWVLQPDADWHGFGEVANDYVLLDPIKVTLVMPGLNAAGK
LQERGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDAN
LPLVDVLPSIAHAGGGCYQGMGLRDLCDALHGCYRDNATAKALKSMYTALPEVAIKPAEA
YDRLVRGEVEAVPIDQLQGRIAAVMLVPYPPGIPLIMPGERFTAATRSILDYLAFARTFD
QAFPGFDIDVHGLQTEAGQYCVDCLVE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagatctaaaattccccgtcctcatcgttcaccgcgacatcaaggccgacacg
gtggccggcgatcgcgtgcgcgccatcgcgcgcgagctggaacaggacggtttcagcatt
ctccccaccgccagtgcagccgagggccgcatcgtcgcctccacccaccacggtctggcc
tgcatcctggtggccgccgagggcgcgggcgagaacagtcgtctgctgcaggacatggtc
gagctgatccgcgtggcgcgggtgcgtgctccgcaattgccgatcttcgccctcggcgag
caggtcaccatcgagaatgcgccggccgaggccatggccgatctcaatcacctgcgcggc
atcctctacctctacgaagacaccgtttccttcctggcccgtcaggtggcgcgggcggcg
cacaactacctcgacggcctgctgccgccgttcttcaaggcgctggtgcagcacaccgca
caatccaactattcttggcacacgcccggtcacggcggcggcgtggcttaccgcaagagt
ccggtaggccaggcgtttcaccagttcttcggggaaaacaccctgcgttcggatctgtcg
gtgtcggtgccggagctggggtcgctgctcgatcacacaggtccgctcgccgaagccgag
gcgcgcgccgcgcgcaacttcggcgccgaccacaccttcttcgtgatcaacggcacgtcc
acggcgaacaagatcgtctggcattcgatggtcgggcgtgacgatctggtactggtggac
cgcaactgccacaagtcgatcctgcattcgatcatcatgaccggcgcgatcccgctgtac
ctgtgccccgagcgcaacgagctgggcatcatcgggccgattccgctgtcggagttcagc
cgtgaatcgatccaggccaagatcgacgccagcccgctggcacgtggtcgcgcgcccaag
gtcaagctggcggtggtgaccaactccacctacgacgggctttgctacaacgccgagatg
gtcaagcaggcgctgggcgattcggtcgaggtgctgcacttcgacgaggcctggtacgcc
tacgccgcgttccatgagttctatgccggccgctacggcatgggcacccagtgcgacgag
cgctcgccgctggtgttcaccacccattccacgcacaagctgctggccgcgttcagccag
gcctcgatgatccatgtgcaggatggcgggcagcgccaattggaccgtgaccgcttcaac
gaagccttcatgatgcacatctccacgtcgccgcagtacggcatcatcgcctcgctggat
gtggcctcggcgatgatggaaggcccggccgggcgttcgctgatccaggaaaccttcgac
gaggccctgagcttccgtcgtgccctggccaacgtgcgccgcaacctcgatgccgaggac
tggtggttcagcatctggcagccgggcgaggccgacggcgccgacagcctgtcgactgcc
gactgggtgctgcagccggacgccgactggcacggtttcggcgaggtagccaatgactat
gtgctgcttgacccgatcaaggtgacgctggtgatgcccggtctcaacgcggccggcaag
ctgcaggagcgtgggatcccggcggcggtggtcagcaagttcctctgggagcgcggcctg
gtcgtggaaaagaccggtctgtattccttcctggtgctgttttccatgggcatcaccaag
ggcaagtggagcacgctgctgaccgaactgctggaattcaagcgcagctacgacgccaat
ctgccgctggtggacgtgctgccctccatcgctcatgcgggtggcggctgctatcagggc
atggggctgcgcgatctgtgtgatgcgctgcatggctgctaccgcgacaacgccacggcc
aaggcgttgaagagcatgtacacggctttgccggaagtggcgatcaagccggccgaggct
tacgaccgcctggtgcgcggcgaggtcgaggcggtgccgatcgatcagctgcaggggcgc
atcgctgccgtgatgctggtgccttatccgccgggcattccgctgatcatgccgggtgag
cgcttcaccgccgcgacccgctcgatactcgattacctggccttcgcgcggaccttcgat
caggccttcccgggcttcgacatcgacgtgcacggcctgcagaccgaggcggggcagtat
tgcgtcgattgtctcgtggagtga
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