Ectopseudomonas mendocina ymp: Pmen_2436
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Entry
Pmen_2436 CDS
T00510
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pmen_2436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmy03400
]
Pmen_2436
Enzymes [BR:
pmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Pmen_2436
DNA repair and recombination proteins [BR:
pmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Pmen_2436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABP85192
LinkDB
All DBs
Position
2698796..2699608
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AA seq
270 aa
AA seq
DB search
MKIVSFNINGLRARPHQLEALIAKHQPDVIGLQETKVADEQFPESEIRQLGYHVHYHGQK
GHYGVALLSRQEPLNLQKGFPNDGEESQRRFIYGTFADAHGNPVTVMNGYFPQGESRDHP
VKFPAKQRFYADLQQLLVERFDPQQALVVMGDINISPEDCDIGIGEANRLRWLKTGKCSF
LPEEREWLATLKNWGLVDSFRHLNPTVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQAL
QGRLKDAGIDYDLRGMDKPSDHAPIWLELA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtctcgttcaatatcaatggcctgcgcgcacgcccccaccagctcgaagcg
ctgatcgccaagcaccagcccgacgtgatcggcctgcaggaaaccaaggtggccgacgag
cagttccccgaaagcgagattcgccagctcggctaccacgtgcactaccacgggcagaaa
ggccattacggcgtcgccctgctctcgcgccaggagcccctgaacctgcagaagggcttt
cccaacgatggcgaggaatcccagcggcgcttcatctacggcaccttcgccgatgcccat
ggcaacccggtcacggtgatgaacggctactttccccagggcgaaagccgtgaccacccg
gtgaagtttcccgccaagcagcgcttctacgccgatctgcagcaactgctggtggaacgc
ttcgatccgcagcaggcgctggtggtgatgggcgacatcaacatcagccctgaggattgc
gacatcggcatcggcgaggccaaccgcctgcgctggctgaaaaccggcaagtgcagcttc
ctgcccgaagaacgcgagtggctggccaccctgaagaactgggggctggtggacagcttc
cgccatctcaacccgacggttaacgaccgtttcagctggttcgactaccgcagccgcggc
ttcgaggacgaacccaagcgcggcctgcgcatcgacgtgatcctcgccagccaggccctg
cagggtcgcctcaaggatgccggcatcgactatgacctgcgcggcatggacaagccgtcg
gaccatgcgccgatctggctcgaactggcctga
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