Ectopseudomonas mendocina ymp: Pmen_2464
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Entry
Pmen_2464 CDS
T00510
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00061
Fatty acid biosynthesis
pmy00071
Fatty acid degradation
pmy01100
Metabolic pathways
pmy01212
Fatty acid metabolism
pmy02024
Quorum sensing
pmy04146
Peroxisome
Module
pmy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pmen_2464
00071 Fatty acid degradation
Pmen_2464
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pmen_2464
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pmen_2464
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmy01004
]
Pmen_2464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmy04147
]
Pmen_2464
Enzymes [BR:
pmy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pmen_2464
Lipid biosynthesis proteins [BR:
pmy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pmen_2464
Exosome [BR:
pmy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pmen_2464
Exosomal proteins of breast cancer cells
Pmen_2464
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABP85220
UniProt:
A4XV54
LinkDB
All DBs
Position
complement(2727957..2729624)
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AA seq
555 aa
AA seq
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MADAIRLPLELFYEREARHPNKRYMVQPLGGGKLLELSWGDVGEQARRAANWLRSRELPQ
GSRIAIVSKNCAHWIIADLAIWMAGHVSVPLYPNLTADSMRQVLEHSEAALAFIGKLDDW
QAMAPGLPQGLPTVSLPLHPQGQFDFSWDDLQRCAPIQDDPKPAADQLATIIYTSGTTGA
PKGVMHNFSNFGFAASNAIALFGVGEDDRLISYLPLCHVAERMFVELASLYAGQTIFFAE
SLDTFLDDLKRARPTVMFGVPRIWTKFQMGVYGKMPAHKLDRLLKLPIIGRIVGRKVLAG
LGLDAIRYALSGAAPVPEALLNWYRRLGMEIQEVYGMTENCGYSHVCRPGKFKQGWIGQN
NPGVEVRIAEDGEVQVRSGATMQGYYKDPVKTAEALTADGFLRTGDKGEQDAEGNLRLTG
RIKEIFKTSKGKYVAPAPIENRIGEHSRIEQVCVVGDGLPQPIALCVLSDVGRQEAANDG
RAELESSLKALVEQVNDRLDHHERLQGLVLVREVWAVENGFLTPTLKIKRAVIEGTYGER
FAEWQQRSEVVLWHD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatgcaatccgtttgccgctcgagctgttctacgaacgtgaagcaaggcacccg
aacaaacgctacatggtgcaacccctgggcggcggaaagctgctggagctgagctggggc
gatgtgggggagcaggcgcgccgagccgccaactggctgcgtagccgcgaattaccgcag
ggcagccgtatcgccatcgtctcgaagaactgcgcgcactggatcatcgccgacctggcg
atctggatggccggccacgtatcggtaccgctctatcccaacctgaccgccgactccatg
cggcaggtgctggagcattccgaggcggcgctggcattcatcggcaagctcgacgactgg
caggccatggccccggggctgccacaagggctgccgaccgtcagcctgccgctgcatcct
cagggccagttcgacttcagctgggacgatctgcagcgctgcgcgccgatccaggacgac
cccaagcccgcggccgatcagctggccaccatcatctacacctccggcaccaccggcgcg
ccgaaaggggtgatgcacaacttctccaacttcggcttcgccgccagcaacgccatcgcg
ctgttcggcgtgggcgaggatgaccgcctgatctcctacctgccgttgtgccacgtggcc
gagcgcatgttcgtcgagctggcgtcgctgtatgccgggcagacgatctttttcgccgaa
agcctggacaccttcctcgacgacctcaagcgtgcccggccgaccgtaatgttcggcgta
ccgcggatctggaccaagttccagatgggggtgtacggcaagatgccggcgcacaagctc
gaccgtctgctcaagctgccgataatcggccgcatcgtcgggcgcaaggtgctcgccggc
ctcgggctggacgccattcgctatgcgctgtccggcgccgccccggtgcccgaggcgttg
cttaactggtaccggcgcctgggcatggagatccaggaggtctatggcatgaccgagaac
tgcggttactcccatgtctgccggcccggcaagttcaagcagggctggatcggccagaac
aaccccggtgtcgaggtgcgtatcgccgaggatggcgaagtccaggtgcgcagtggcgcc
accatgcagggctactacaaagacccggtcaagaccgccgaggcgctgaccgccgacggc
ttcctgcgtaccggcgacaagggcgagcaggacgccgagggcaatctgcgcctgaccgga
cggatcaaggaaatcttcaagaccagcaagggcaagtacgtggcgccggcgccgatcgag
aaccgcatcggcgagcattcgcgcatcgagcaggtctgcgtggtgggcgacggcttgccc
cagccgatcgcgctgtgcgtgctgtccgacgtggggcgccaggaggcggccaacgacggt
cgtgccgagctggagagcagcctcaaggcgctggtggagcaggtcaatgaccgcctcgat
catcatgagcgtctgcaggggctggtgctggtccgcgaggtctgggcggtggaaaacggc
tttctcacacccacgctgaagatcaagcgcgccgtaatcgaaggtacctacggcgagcgt
ttcgccgaatggcagcagcgcagcgaagtggtgctctggcacgattga
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