Ectopseudomonas mendocina ymp: Pmen_2673
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Entry
Pmen_2673 CDS
T00510
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pmen_2673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmy03021
]
Pmen_2673
Transcription machinery [BR:
pmy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pmen_2673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
MerR
Rv2175c_wHTH
HTH_24
HTH_29
Sigma70_r3
HTH_IclR
HTH_31
PhyR_sigma-like
HTH_3
HTH_AsnC-type
HTH_17
TnsD
HTH_5
HTH_11
MerR_1
HTH_10
FaeA
Fe_dep_repress
HTH_38
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ABP85428
LinkDB
All DBs
Position
2932147..2932671
Genome browser
AA seq
174 aa
AA seq
DB search
MRVSVQDSSNQQLVGLLYRDHRDWLFGWLRKSLNCTQRAEDLSQDTFVRLLGRPDLHSPR
EPRALLTTIARGLLIDQFRRSALERAYLEELALAPEALQPSPEEQALALEQLSEIDRLLG
HLSSKARAAFLYNRLDGLGHAEIAERLGVSPSRVRQYLAQGLRQCYIALYGAPQ
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgtcggttcaggattccagcaatcagcagttggtcggcctgctttaccgcgac
catcgcgactggctgttcggctggctgcgcaaaagtctgaactgcacgcagcgcgccgaa
gacctgagtcaggacaccttcgtgcgcctgctcggccgcccggacctgcacagcccgcgt
gaacctcgtgccttgctcaccaccatcgccaggggcctgctgatcgaccagttccgccgc
agtgcgctggagcgcgcctatctcgaagaactcgctctggcccccgaggccctgcaaccg
agccccgaggaacaggcgctggcgctggaacagctgagcgagatcgatcgtctgctcgga
cacctgtcgagcaaggcgcgcgccgccttcctctacaaccgcctggacggtctcggccat
gccgagatcgccgagcgtctgggcgtatcgccctcgcgggtgcgccagtacctcgcccag
ggcctgcgccagtgctacatcgcgctgtatggagcgccgcaatga
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