Ectopseudomonas mendocina ymp: Pmen_2717
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Entry
Pmen_2717 CDS
T00510
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmy03016
]
Pmen_2717
Enzymes [BR:
pmy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Pmen_2717
Transfer RNA biogenesis [BR:
pmy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pmen_2717
Prokaryotic type
Pmen_2717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABP85472
UniProt:
A4XVV6
LinkDB
All DBs
Position
complement(2979742..2980605)
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AA seq
287 aa
AA seq
DB search
MSDVVPVAAAEMAAAGFSRIALGLEYKGARYRGFQRQAGNVASIQGCLESALSKVAGGEP
INIMCAGRTDASVHASGQVVHFDTAVERPLHAWIMGANMNLPNDISVTWARVMPAHFHAR
FSAMARRYRYVIYNDPIRPAHMAEEVTWNHRPLDVTRMREAARALVGTHDFSAFRATQCQ
AKSPIKTVHHLQVIEHGCFIVLDIRANAFLHHMVRNIAGVLMAIGAGERPVEWAREVLER
ADRRSGGVTAHPYGLYLVQVEYPQEFELPQRYLGPHFLSALADVRQG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgtagtacctgtagcggccgccgaaatggcggccgctggcttttccagaatc
gccctgggtctcgagtacaagggcgcgcgttaccgtggcttccagcgccaggccggcaat
gtcgcttcgattcagggttgtctggaaagcgcgctgtccaaggttgctggcggtgagccg
attaacatcatgtgcgccggccgcaccgacgcatcggtgcacgccagcggccaggtggtg
catttcgataccgccgtcgagcgtccgctgcatgcctggatcatgggcgccaacatgaac
ctgcccaatgacatcagcgtgacctgggccagggtcatgcctgcgcactttcatgcccgt
ttcagcgccatggcgcgccgctatcgctatgtgatctacaacgatccgatccgcccggcg
cacatggccgaagaggtgacctggaatcaccgtccgctggacgtgacgcggatgcgcgaa
gcggcgcgcgcgctggtggggacgcatgatttcagcgcttttcgcgccacccagtgccag
gccaagtcgccgatcaagaccgtgcaccatctgcaggtgatcgagcatggctgcttcatt
gtgctggatatccgcgccaatgccttcctccatcacatggtgcgcaatattgccggcgtg
ctgatggccattggcgccggcgagcgaccggtcgagtgggcgcgcgaggtgctcgagcgc
gcagaccggcgcagcggtggggtgacagcccatccttacgggctttatctggtgcaggtg
gagtacccgcaggagttcgagttgccgcagcgttacctggggccgcatttcctctctgcg
ctggccgacgtgcgacagggctag
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