Ectopseudomonas mendocina ymp: Pmen_3111
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Entry
Pmen_3111 CDS
T00510
Name
(GenBank) transcriptional regulator, TyrR
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmy03000
]
Pmen_3111
Transcription factors [BR:
pmy03000
]
Prokaryotic type
Other transcription factors
Others
Pmen_3111
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
ACT
PAS
PAS_8
HTH_38
AAA_5
PAS_4
ACT_4
PAS_9
ACT_ACR9_3rd
HTH_11
ACT_AHAS_ss
Diguanyl_cycl_sensor
ACR10_N
Motif
Other DBs
NCBI-ProteinID:
ABP85864
UniProt:
A4XWZ8
LinkDB
All DBs
Position
complement(3437801..3439354)
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AA seq
517 aa
AA seq
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MRIKVHCQNRVGILRDILNLLVDYGINVARGEVGGEQGNAIYLHCPNLINLQFQSLRPKF
EAIAGVFGVKRVGLMPSERRHLELNALLGALDFPVLSIDMAGSIVAANRSAAQLLGVRVD
EVPGMALSRYAEDFDLPELVRANKTRINGLRVKIKGDVFLADIAPLQNEHDDSEALAGAV
LTLHRADRVGERIYHVRKQELRGFDSIFQSSKVMAAVVKEARRMAPLDAPLLIEGETGTG
KELLARACHLASPRGQSPFMALNCAGLPESMAETELFGYGPGAFEGARPEGKLGLLELTA
GGTLFLDGVGEMSPRLQAKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGE
FRQDLYHRLNVLSLHIPPLRECLDGLEPLVEHFLDSASRQIGCPLPKLAPQAFERMAHYH
WPGNVRQLENVLFQAVSLCDGGTVKAEHIRLPDYGAPQPLGEFSVEGSLDDILGRFEKAV
LERLFRDHPSSRQLGKRLGVSHTTIANKLRQHGLGRE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcaaggtccattgccagaaccgtgtcggcatcctgcgtgacatcctcaacctg
ctggtcgactacggcatcaacgtcgcccgtggcgaagtcggtggcgagcagggcaacgcc
atctacctgcactgcccgaatctgatcaatctgcaattccagtcgctgcggccgaagttc
gaggccattgccggtgtgttcggcgtcaaacgcgtcggcctgatgcccagcgagcggcgt
catctggagctcaatgcgctgctcggtgcgctggattttccggtgctgtccatcgacatg
gccggcagtatcgtcgcggccaaccgcagcgccgcgcagttgctcggcgtgcgcgtggac
gaggtgccgggcatggccctgtcgcgttatgccgaggatttcgatctgcccgaactggtg
cgcgccaacaagacgcggatcaacggcctgcgggtgaagatcaagggcgacgtgtttctt
gccgatatcgcgccgctgcagaacgaacacgacgacagcgaggcattggccggtgcggtg
ctgaccctgcaccgcgccgatcgggtgggtgaacgcatctaccacgtgcgcaagcaggag
ctgcgcggcttcgactcgatcttccagagctccaaggtcatggccgcggtggtcaaggag
gcgcggcgcatggcaccgctggatgcgccgctgctgatcgagggcgaaaccggtaccggc
aaggaattgctggcgcgtgcctgccacctggccagcccgcgtggtcagtcgccgttcatg
gcgctcaattgcgcggggttgcccgagtccatggccgagaccgagctgttcggttacggc
cccggcgccttcgaaggggcgcgcccggaaggcaagctcggcctgctcgagctgaccgcc
ggcggcacgctgtttctcgatggcgtcggcgagatgagcccgcgcctgcaggccaagctg
ctgcgctttctgcaggacggctgcttccgccgtgtcggcagcgacgaggaggtgtacctg
gacgtgcgagtgatctgcgccacccaggtcgatctgtccgagctgtgcgcccgcggcgag
ttccgtcaggatctctaccaccgtctcaacgtgctgtccctgcatatcccgccgctgcgc
gaatgcctcgacggcctggagccgttggtggagcactttctcgactcggccagccggcag
atcggttgcccattgccgaagctggcgccgcaggccttcgagcgcatggcccattaccac
tggccgggcaacgtgcgccagttggaaaacgtgctgttccaggcggtatcgctgtgcgat
ggcggcacggtgaaggccgagcatatccgcctgccggactacggcgcgccgcagccgctc
ggcgagttctcggtggaaggcagcctcgacgacatcctcggccgcttcgagaaagccgtg
ctggagcggctgtttcgcgatcatcccagcagccgtcagctgggcaagcgcctcggcgtg
tcacacaccaccatcgccaacaagctgcgtcagcatgggttgggcagggagtag
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