Ectopseudomonas mendocina ymp: Pmen_3308
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Entry
Pmen_3308 CDS
T00510
Name
(GenBank) protein of unknown function DUF853, NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmy03400
]
Pmen_3308
DNA repair and recombination proteins [BR:
pmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Pmen_3308
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_10
TrwB_AAD_bind
ResIII
SLFN-g3_helicase
T2SSE
AAA_7
AAA_19
Zot
Hydrolase
MobB
Helitron_like_N
nSTAND3
CbiA
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
ABP86061
UniProt:
A4XXJ5
LinkDB
All DBs
Position
complement(3650351..3651835)
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AA seq
494 aa
AA seq
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MAENSQFLLGAGSDGQPVGQPLRLANRHGLIAGATGTGKTVTLQRLIETFSDAGVAVFAA
DVKGDLCGLGAAGAPQGKVAERIASMPWLGHVPQAYPLTLWDVHGQSGHPLRTTLSEMGP
LLLGALLELTDSQQAALYAAFKVADRESLLLLDLKDLKALLGYLKDNPQVLGEDSALFTS
TSAQALLRRLASLEQQGAEALFGEPALQLEDLLYPDRDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADRPVLALFFDEAHLLFQGTPKALQERLEQVVRLIRSKGVG
VYFVTQSPSDLPDEVLAQLGLRIQHGLRAFTAREQKALRAVADGFRPNPAFDSLSVLTEL
GIGEALVGTLEEKGTPAMVQRVAIAPPQSRIGPLNESERAALVRQSSLAGRYDKPIDRES
AYELLTARAAQASAEAPAQAGGRQKAAAQEQGLGQMAGDLLGGAMKSALRQAANQLGRQL
VRGLMGSLMGGKRR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaattcacagttcctgcttggtgctggcagcgatggccagcccgtcggccag
ccgttgcggctggccaatcgtcacggcctgatcgcgggggccaccggcaccggcaagacg
gtgaccctgcaacgcctgatcgaaaccttcagtgatgccggcgtggcggtgttcgccgcc
gacgtgaagggcgacctgtgcggtttgggagcggccggtgcgccgcagggcaaggtggcc
gaacgtatcgccagcatgccctggctgggccatgtgccgcaggcctacccgttgaccctg
tgggacgtgcatgggcaaagcggccacccgctgcgtaccaccttgagcgagatggggccg
ctgttgctcggcgcgctgctggagctgaccgacagccagcaggctgcgctctacgccgcg
ttcaaggtggcggatcgagagagcttgctactgctcgatctgaaggacctcaaggcgctg
ctcggctacctgaaggacaacccgcaggtgctcggcgaggacagtgcgctgttcaccagc
acctcggcccaggcactgctgcgccgcctggccagcctggaacagcagggcgccgaggcg
ctgttcggcgagccggcgctgcaactggaagatctgctgtatccggatcgcgacggccgt
gggcggattcatctgctcgacgccagccgcctggtgcacgaggcacccaaggtctacgcg
accttcctgctatggctgctggccgaactgttcgaacaactgcccgagcgtggcgacgcc
gacaggccggtgctggcgctgttcttcgacgaggcgcacctgctgttccagggcacgccc
aaggcgctgcaggagcgtctggaacaggtggtgcggctgatccgttccaagggcgtcggg
gtgtatttcgtcacccagtcgccgagcgacctgccggacgaggtgctggcccagctcggc
ctgcgcatccagcacggcctgcgtgccttcaccgccagggagcagaaggcgctgcgcgcg
gtggccgacggttttcgtcccaacccggcgttcgacagcctgagcgtgctgaccgaactg
ggcatcggtgaggcgctggtcggcaccctggaggaaaagggcaccccggccatggtgcag
cgcgtggccattgcgccgccgcagtcgcgcatcggtccgttgaacgagagtgagcgcgct
gcgttggtccgtcagtcaagcttggccgggcgctacgacaagcccatcgaccgcgagtcg
gcctatgagctgcttactgcacgtgccgcgcaggccagtgccgaggcgccggctcaggca
ggtgggcggcagaaggccgcggcgcaggagcagggcctgggccagatggccggtgacctg
cttggcggtgcgatgaaatcggcgttgcgtcaggccgccaaccagctcggccggcaactg
gtgcgcgggttgatggggtcgttgatgggcggcaagaggcgttag
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