Ectopseudomonas mendocina ymp: Pmen_3352
Help
Entry
Pmen_3352 CDS
T00510
Name
(GenBank) transcriptional regulator, TetR family
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
pmy
Ectopseudomonas mendocina ymp
Module
pmy_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmy03000
]
Pmen_3352
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pmy01504
]
Pmen_3352
Transcription factors [BR:
pmy03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Pmen_3352
Antimicrobial resistance genes [BR:
pmy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Pmen_3352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
LacI
HTH_40
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ABP86104
UniProt:
A4XXN8
LinkDB
All DBs
Position
3702353..3702988
Genome browser
AA seq
211 aa
AA seq
DB search
MPDKLLQPSGPGRPKDLAKRRAILDAAKTLFLRHGYDGSSMDAIAAEAGVSKLTVYSHFT
DKETLFSAAVKAKCEEQLPELLFELPAGAPIETVLLNIGRGFHALISSRESVELHRMMVS
LASQDPKLALMFYQAGPQRVLQEMEALLCRADQGGLLRIDDPLMAADQFFSLVKGGAHFR
LLIGCCAPLEGTAAERHVHEAVELFLRAYRC
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacaagttgttacagccttccggccccggccgaccgaaggacctcgccaaacgc
cgcgccatcctcgacgcggccaagaccctgttcctgcgccatggctacgacggcagcagc
atggacgccatcgccgccgaggccggggtttccaagctcacggtgtacagccatttcacc
gacaaggagacgctgttctccgcggcggtgaaggccaagtgcgaggaacagctgccggag
ctgctgttcgagctgccggccggggcgccgatcgagaccgtgctgctgaatatcggccgc
ggcttccacgcgctgatcagcagccgcgagtcggtggagctgcatcggatgatggtcagc
ctggccagccaggatcccaagctggcgctgatgttctatcaggccgggccgcagcgcgta
ctgcaggagatggaagcgctgctgtgcagggcagatcagggcggcctgctgcggatcgac
gacccgctgatggccgccgaccagttcttcagcctggtcaagggcggcgcgcacttccgc
ctgctgatcggttgctgcgccccgctcgaaggcacagccgccgaacgacacgtgcacgag
gcagtggaactgtttctacgcgcctatcgatgctga
DBGET
integrated database retrieval system
