KEGG   Pseudomonas mendocina ymp: Pmen_3426
Entry
Pmen_3426         CDS       T00510                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmy  Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmy03400]
    Pmen_3426
Enzymes [BR:pmy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pmen_3426
    5.6.2.6  RNA 3'-5' helicase
     Pmen_3426
DNA repair and recombination proteins [BR:pmy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Pmen_3426
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ABP86178
UniProt: A4XXW2
LinkDB
Position
3781365..3783581
AA seq 738 aa
MSLPPSSSESAGFALLEPRIQRWIWSEGWTSLRDAQERAIPALLGADQDVIIAAATAAGK
TEAAFLPILTNLLQDTETPGAVLYISPLKALINDQWDRLARLCDELELPVIAWHGDISAS
RKHRFLKSPEGILLITPESLEALFVNRGTSLAGLFANLRYLVVDELHAFIGSERGKQLQS
LMHRVETIIDRPLPRVGLSATLGDMMLAAAFLRPNAPHHVSVIESKGSGQILKVQIRGYV
ESKHALPIQPEDDEVFSPDHAIAEHLFQVLRGSNNLIFPNSRTQVEWFADNLRRRCEQDG
VPNEFWPHHGSLAKDIREETEKALKGGDRPATAVCTTTLELGVDIGSIKTVVQIGAPPSV
ASLRQRLGRSGRRPGEAAILRSYCKERQLDDGSPLSDRLRQGLLQSIAMIRLLMQGWFEP
PRVHGLHLSTLVQQCLSVIAQRGGATAAELWSTLICSGPFTGVEQGSFLSLLRALGERDL
ITQEPSGLLLPGVMGERMINHYDFYSAFVSNEEFRLVCDGKPLGALPVSRPLTVDQRIIF
AGRRWRVTSVDTKAKVIVVRSDPGGAPPSFDGLGARVHDRVRQEMKAVLLETDIYPYLDT
TAQELLAQARRTFSELGLEHSSMTESGGKTYLFTWQGDWTNDALAILLTYTGLASENSGL
VIEVEGDRTSLESKLREIAEWDGIDESAVLVEVQNMAQEKWDWVLPPALLMQSYATMQLD
LGGAKTLAVGLMSPAVTP
NT seq 2217 nt   +upstreamnt  +downstreamnt
atgagcttgccaccttccagctctgaatcggctgggttcgcactccttgagccgcgaatc
cagcgctggatatggtccgaaggctggacctccctgcgcgatgcccaggagcgcgctatc
cctgcgcttttgggcgcggatcaggatgtcatcatcgcggcggctacagctgcagggaaa
accgaggccgcgttcctgcccatccttaccaacctcctgcaggacacagaaacgccaggg
gcggtgctttacatcagcccgttaaaggctctcatcaatgaccagtgggatcgtttggcg
agactttgcgatgagcttgaacttccagtcattgcttggcatggggatatatcagcgagc
cgcaaacatcgcttcctcaagtccccggaaggcattctgctgatcacgccggagtcgctc
gaagctcttttcgtcaacagggggaccagtctagcgggattgtttgccaacctacggtac
ctagtggtggatgagctccatgcctttatcggtagtgagcgaggcaagcagctccagtca
ctcatgcatcgagtggaaacaatcattgatcgccccctgcccagggttggtctttccgcc
acgctgggcgacatgatgctggccgctgcctttttgcgtcccaatgcccctcatcatgta
tcggtgattgagtccaaggggagtggccagatacttaaggttcagattagagggtatgtg
gagtccaagcatgcgctcccgatacagcctgaagatgatgaggttttttctccggaccat
gccatcgcagagcacctctttcaggtactacggggcagcaacaacctgatcttccccaac
agtcgaactcaggtggagtggttcgctgacaatctgcgtcgccgttgcgagcaggatggt
gtaccgaacgagttctggccgcatcacggcagcttggcgaaggacattcgagaggaaacc
gagaaagcgctgaaaggcggtgaccggcctgccaccgcagtttgcactaccacgctggag
cttggggtcgatataggcagcatcaagacggtggtgcagatcggggcgccgccatcggta
gccagcttacgtcagcgcttgggtcgatccgggcgccgtccgggagaagcagccattctc
cgaagttactgcaaggagcgtcagctggacgatggctcgccactgtcggatcgacttcgc
cagggtttgctgcaaagcatcgcgatgatccggttgttgatgcagggctggttcgagcca
cctcgtgttcatggccttcatttatcgacactggtacagcagtgcctctcggtgatagcc
cagcggggtggagctacagctgcagagctgtggagcaccttgatatgcagtggtccgttc
actggggtggagcagggcagcttcctcagtttgcttcgtgccctcggtgagcgcgatttg
ataacccaggaaccatcggggctcctgctgcccggtgtgatgggggaacgcatgatcaac
cactacgacttctacagtgcatttgtcagcaatgaagagttccgcctggtatgcgatggc
aaaccacttggcgcattgcccgtctccaggccactgaccgtcgatcagcgcatcatcttt
gcggggcgccgctggcgggtcacgagcgtggacactaaggccaaggtcatcgtcgtgaga
tccgatcctggtggtgctcccccgtccttcgacgggcttggagcccgtgtacatgatcgg
gttcggcaagagatgaaggccgtcttgctggagacggacatctatccctatctcgatacc
acggcgcaggaactactggctcaggcgcgtagaaccttttcggagctcggattggaacat
tcgagcatgaccgaaagcggaggtaagacttaccttttcacctggcaaggcgattggacg
aacgatgcactggctatcttgctgacgtataccggactagccagtgagaacagtggattg
gtcatcgaggttgagggagatcggacgtcgcttgaaagcaagctgcgcgagatcgccgag
tgggatggcattgatgaatccgctgttctggtggaagtacagaacatggctcaagagaaa
tgggattgggtgctcccgccagcgttactcatgcagtcatacgccacaatgcagctggat
ttgggtggagcaaagacattggcagtggggctgatgagccctgcggtgactccctga

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