Pseudomonas mendocina ymp: Pmen_3474
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Entry
Pmen_3474 CDS
T00510
Name
(GenBank) aminomethyltransferase
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00260
Glycine, serine and threonine metabolism
pmy01100
Metabolic pathways
Module
pmy_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pmen_3474
Enzymes [BR:
pmy01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Pmen_3474
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Pmen_3474
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
FAD_binding_2
NAD_binding_8
GIDA
HI0933_like
DAO
Thi4
FAD_binding_3
Lycopene_cycl
Pyr_redox
AlaDh_PNT_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ABP86224
UniProt:
A4XY08
LinkDB
All DBs
Position
3831656..3834553
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AA seq
965 aa
AA seq
DB search
MNRLPAPMGLLIDRDQPLRFSFDGTDYQGLAGDSIASALLANGRWLLSRSFKYHRPRGPL
SMAGQDANTLVQLPDEPNVLADTQALQAGLAVTGQNFNGSLDNDRDAYLGKFSKFMPVGF
YYRSFYKPKGIWKVWEPLIRKKAGLGVLDLNFKPQYYDKAYLFVDVAIVGAGPAGLSAAL
TAANAGAKVLLIEQQPLLGGSLTYARFDIEGRRAEALRRDLVSAVQGHTNIQVLTQATCN
AWFTDNYLPVIQSRRMYKVRARQCIVSAGSFDQPVVFRNNDLPGVMLTSAAQRLMKLYAV
KPGQRAVLLTGNDDGYLAALDLAEQGVQVAALVDMRLQPADVALKVAVEKQGIPCHLGST
VYEALHEKGMRHVSGADIRRITAQGQVAAQGVHVDCDLLCMSAGYMPVYQLLCQAGGKLA
YDEQRAEFAISGLPEGLAIAGSVGGRHHLDNVLADGARAAARAVEALGLDAGIGEASLRG
EARVNFEWPIFPHPKGKDFVDFDEDLQVRDIVNATRIGYRDVQLVKRFSTVGMGPSQGRH
SALPTARLVAQATGRSIGETGVTTARPPFEAEKLAHVAGRAFDPYRHTAMHSRHVAAGAK
LMPAGIWQRPAFYGKAEDRERCMQEEARHVREKVGLIDVSTLGGLDVRGPDAAELLERIY
TLPFKKQPLLRTRYALMTNEHGVVIDDGVCARLADNHFYVTATTSGVDRIYQQMLKWNAQ
WRLNVDITNVTAALAAVNLAGPLSRQVLQKLCADVDLSAEGFPYLAARTGSVAGIPARLM
RVGFVGELGYEIHVPARHGARLWDALMEAGAEFGIRPFGVETQRLLRLEKGHVIISQDTD
GMTHPGEIDMQWAIGRKKPFFVGKRSIEILEAQPLKRKLVGFTLPKGSAQPLEGHLVLNG
PDISGNVTSCEYSATLGQIIGLAYAGADQAEPGMRIPIRVDGGQVVQATVVQLPFFDPDN
QRQEL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcctcccagcccccatgggcctgctgatcgaccgcgatcagccactgcgtttc
agcttcgacggcaccgattaccagggtcttgctggcgacagcatcgccagcgcgctgctc
gccaacggccgctggttgctctcgcgctcgttcaagtaccaccgcccgcgcggcccgttg
agcatggccgggcaggacgccaacaccctggtgcagttgcctgacgagcccaatgtgctg
gccgacacccaggcgctccaagccgggctcgccgtcaccgggcagaacttcaacggctcg
ctggacaacgaccgcgacgcctacctgggcaagttctccaaattcatgccggtgggtttc
tactaccgctcgttctacaagcccaagggcatatggaaggtgtgggagccgctgatccgc
aagaaggccggcctcggcgtgctcgatctgaacttcaagccgcagtactacgacaaggcc
tacctgttcgtcgacgtcgccatcgtcggcgccggcccggccgggctgtccgccgcgctg
accgccgccaatgccggggccaaagtgctgctgatagaacagcagccgctgctcggcggc
tcgctgacctacgcccgtttcgatatcgagggccgccgcgccgaggcgctgcgccgtgat
ctggtgagcgccgtgcaaggccacaccaatatccaggtactgacgcaggccacctgcaac
gcctggttcaccgacaactacctgccggtgatccagagccgacggatgtacaaggtgcgt
gcgcggcagtgcatcgtcagcgccggctccttcgaccagccggtggtgtttcgcaacaac
gacctgcccggggtcatgctcaccagcgccgcccagcgcctgatgaagctctacgcggtc
aagcccggccagcgcgccgtgctgctcaccggcaacgacgacggctacctggccgccctc
gacctggccgaacagggcgtgcaggtcgctgccctggtggacatgcgcttgcagccggcc
gatgtcgcgctgaaggtcgccgtggaaaagcagggcatcccctgccacctgggcagcacc
gtgtacgaggccctgcacgagaagggtatgcgccatgtcagcggcgcggatatccgccgc
atcaccgcccagggccaggttgccgcccagggagttcacgtcgactgcgacctgctgtgc
atgtccgccggctacatgccggtctaccagctgctgtgccaagcaggcggcaagctggcc
tacgacgagcagcgcgccgagttcgccatcagtggcctgccggaagggttggcgatcgcc
ggttcggtcggcggtcgccaccatctggacaacgtactcgccgacggcgcccgcgccgcc
gcacgggcagtcgaagcactgggcctggatgccggcattggcgaagcgagcctgcgcggc
gaggcgcgggtcaacttcgagtggccgatattcccccatcccaagggcaaggatttcgtc
gacttcgacgaagacctgcaggttcgcgacatcgtcaacgccacccgcatcggctaccgc
gacgtgcaactggtcaagcgcttttccaccgtcggcatgggcccgtcccagggccgccac
tcggcgctgcccaccgcgcgcctggtagcccaggccaccggccgcagtatcggcgaaacc
ggcgtgaccaccgcgcggccgccgttcgaagcagaaaaactggcccacgtcgccggccgc
gccttcgacccctatcgtcacaccgccatgcacagccgccatgtcgccgccggcgccaag
ctgatgcccgccggtatctggcagcgtccagcgttctacggcaaggccgaagatcgcgaa
cgctgcatgcaggaagaagcccgccacgtgcgcgagaaggtcggcctgatcgacgtgtcc
accctcggcggcctcgacgtgcgcggcccggatgccgccgagttgctcgagcgcatctac
accctgccattcaaaaagcagccgctgctgcgcactcgctatgcgttgatgaccaacgag
cacggcgtggtgatcgacgacggcgtctgcgcgcggctggcggacaatcacttctacgtc
accgccaccaccagcggcgtcgaccgcatctaccagcagatgctcaagtggaacgcgcag
tggcggctgaacgtggacatcaccaacgtcacagccgccctggcggcggtcaacctggcc
gggccactgtcgcgccaggtgctgcagaagctctgcgcggacgtcgacctgtccgccgag
ggcttcccctatctggccgcacgcaccggcagcgtcgccggcataccggcgcggctgatg
cgggtcggtttcgtcggtgagctgggctatgaaatccacgtaccggcacgtcatggggca
cggctgtgggacgcattaatggaggccggcgcagagttcggtatccgccccttcggcgtc
gagacccaacgcctgctgcgcctggagaaaggccacgtgatcatcagccaggacacagat
ggtatgacccatcccggcgagatcgacatgcagtgggccatcggccgcaagaaaccgttc
ttcgtcggcaagcgctcgatcgaaatcctcgaagcgcagccgctcaagcgcaagctggtc
ggtttcaccctgcccaagggcagtgcgcagccgctggagggtcacctggtgctcaatggg
cccgacatcagcggcaacgtcacctcttgcgagtattcggcgaccctcggccagatcatc
ggcctggcctacgccggcgccgaccaggccgagccaggcatgcggattccgatccgagtc
gatggcggccaggtggtgcaggccacggtggtgcaactgcccttcttcgatcccgacaac
cagcgccaggagctctga
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