Pseudomonas mendocina ymp: Pmen_3530
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Entry
Pmen_3530 CDS
T00510
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Pmen_3530
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmy01007
]
Pmen_3530
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmy03016
]
Pmen_3530
Enzymes [BR:
pmy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Pmen_3530
Amino acid related enzymes [BR:
pmy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Pmen_3530
Transfer RNA biogenesis [BR:
pmy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Pmen_3530
Prokaryotic type
Pmen_3530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
ABP86278
UniProt:
A4XY62
LinkDB
All DBs
Position
3888569..3891400
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AA seq
943 aa
AA seq
DB search
MDKTYQPHAIESNWYQTWEQNNYFAPQGSGEPYTIMIPPPNVTGSLHMGHGFNNAIMDAL
IRFRRMQGRNTLWQPGTDHAGIATQMVVERQLAAQGIGRHDLGREKFLEKVWEWKNQSGG
TITRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKFHTAI
SDLEVENHDEKGSLWNLRYPLADGKKTADGKDYLIVATTRPETMLGDSAVAVHPEDERYK
ALIGSFVELPLVGRRIPIVADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLINIFDA
DAAVLARAQVFNLDGSVNSEVDGSLPAEYAGLDRFEARKRIVAAFEAAGLLEKIEDHALK
VPKGDRSGTVIEPWLTDQWYVSTKPLAEKAIAVVESGEIQFVPKQYENMYFSWMRDIQDW
CISRQLWWGHRIPAWYDEAGNVYVGRDEAEVRAKHNLEGVALRQDEDVLDTWFSSGLWTF
STLGWPEQTDFLKTFHPTDVLVTGFDIIFFWVARMIMLSTHLTGQIPFKTVYVHGLVRDG
QGQKMSKSKGNVLDPLDIVDGITLDELLEKRTSGMMQPKLAEKIAKQTRAEFPEGIASYG
TDALRFTFCSLATTGRDVKFDMGRVEGYRNFCNKLWNATNFVLENTEGKDCGVNGEPVEL
SAVDRWIISALQRCEQDVTRHLDAFRFDLATQALYEFVWDEYCAWYLELVKPVLWDETAS
AERQRGTRRTLVRVLEVILRLAHPFMPFITEEIWQRIKALAGKDGATLMLQPWPVAAEER
IDAAAEADIEWVKQLMLGVRQIRGEMKISMAKRIDIIVANASDSDLRRLADFEPLLSKLA
KLESVRVLGAGEEAPMSATALVGEMQVLVPMAGLIDKDAELARLDKEVARLQGEVQRVGG
KLANEGFVAKAPAEVLDKERAKLAEAEQALSKLVEQRGKIAAL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacctaccagccgcacgccatcgaatccaactggtaccagacctgggagcag
aacaactacttcgccccacaaggtagcggtgagccgtacaccatcatgatcccgccgccg
aacgtcaccggcagcctgcacatggggcacggcttcaacaacgcgatcatggatgcgctg
atccgtttccgccgcatgcagggccgcaacaccctgtggcagccgggcaccgaccacgcc
ggtatcgccacccagatggtggtggagcgccagctcgccgcgcagggcatcggccgtcac
gacctgggccgcgagaagttcctggagaaggtctgggagtggaagaaccagtccggcggc
accatcacccggcagatccgtcgcctgggctcgtccgtagactggtcgcgcgagcgcttc
accatggacgacggcctgtccgaagcggtcaaggaagccttcgtgcgcctgcacgaggat
ggcctgatctaccgcggcaagcgcctggtcaactgggacaccaagttccacaccgccatt
tccgacctggaagtggaaaaccacgacgagaaaggctcgctgtggaacctgcgctacccg
ctggccgacggcaagaagaccgccgacggcaaggactacctgatcgtcgccaccacccgc
ccggaaaccatgctcggcgacagcgccgtggccgtgcatccggaagacgagcgctacaag
gcgctgatcggcagcttcgtcgaactgccgctggtgggccgccgcattccgatcgtcgcc
gacgactattgcgaccccgagttcggcaccggctgcgtgaagatcaccccggcgcacgac
ttcaacgactacgaagtgggcaagcgccacaacctgccgctgatcaacatcttcgacgcc
gacgccgccgtgctggcgcgcgcccaggtgttcaacctcgacggcagcgtcaacagcgag
gtggacggcagcctgccggccgaatacgccggcctggaccgcttcgaggcgcgcaagcgc
atcgtcgccgccttcgaagccgcgggcctcttggagaagatcgaagaccacgcgctgaaa
gtaccgaagggcgaccgctccggcaccgtgatcgagccgtggctgaccgaccagtggtac
gtctccaccaagccgctggccgagaaggccatcgccgtggtcgagagcggcgagatccag
ttcgtgcccaagcagtacgagaacatgtacttcagctggatgcgtgatatccaggactgg
tgcatcagccgtcagctgtggtggggccaccgcatcccggcctggtacgacgaggccggt
aacgtctatgtcggccgcgacgaagcggaagtgcgcgccaagcacaacctcgaaggcgtc
gccctgcgccaggacgaagacgtgctggacacctggttcagctccggcctgtggaccttc
tccaccctcggctggcccgagcagaccgatttcctcaagaccttccaccccaccgacgtg
ctggtcaccggcttcgacatcatcttcttctgggtcgcgcggatgatcatgctgtcgacc
cacctgaccgggcagatcccgttcaagaccgtgtacgtgcacggtctggtgcgcgacggc
cagggccagaagatgtccaagtccaagggcaacgtgctcgacccgctggacatcgtcgac
ggcatcaccctcgacgagctgctggaaaaacgcaccagcggcatgatgcagcccaagctg
gccgagaagatcgccaagcagacccgcgccgagttccccgagggcatcgccagctacggc
accgacgccctgcgctttaccttctgttcactcgcgacgacaggccgcgacgtgaagttc
gacatgggccgcgtcgagggctaccgcaacttctgcaacaagctgtggaacgccaccaac
ttcgtcctggaaaacaccgaaggcaaggactgcggcgtcaatggcgagccggtggagctg
tccgccgtcgaccgctggatcatttccgccctgcagcgctgcgagcaggacgtcacccgc
cacctcgacgccttccgcttcgacctggccacccaggccctgtacgaattcgtctgggac
gagtactgcgcctggtacctggagctggtgaagccggtgctgtgggacgaaaccgccagc
gccgagcgccagcgcggcacccgtcgcaccctggtacgcgtactggaagtgatcctgcgc
ctggcccatccgttcatgcccttcatcaccgaagagatctggcagcgcatcaaggcactg
gccggcaaggacggcgccaccctgatgctgcagccctggccggtggcagccgaggagcgc
atcgacgccgccgccgaggccgatatcgagtgggtcaagcagctgatgctcggcgtacgg
cagatccgtggcgagatgaagatctccatggccaaacgtatcgacatcatcgtcgccaac
gcctcggactccgacctgcgccgcctggccgacttcgagccgctgctgagcaagctggcc
aagctggagtcggtccgcgtgctgggcgcaggcgaggaagcgccgatgtccgccactgcc
ctggtcggcgagatgcaggtgctggtgccgatggccgggctgatcgacaaggacgccgag
ctggcgcgcctggacaaggaagtcgctcgtctgcagggcgaagtgcagcgcgtcggcggc
aagctggccaatgaaggcttcgtcgccaaggcgccggccgaagtgctggacaaggaacgc
gccaagctggccgaggccgagcaggcgctgagcaagctggtggagcagcgcggcaagatc
gccgcgctctga
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