Ectopseudomonas mendocina ymp: Pmen_3729
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Entry
Pmen_3729 CDS
T00510
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy03030
DNA replication
pmy03430
Mismatch repair
pmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pmen_3729
03430 Mismatch repair
Pmen_3729
03440 Homologous recombination
Pmen_3729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmy03032
]
Pmen_3729
03400 DNA repair and recombination proteins [BR:
pmy03400
]
Pmen_3729
Enzymes [BR:
pmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pmen_3729
DNA replication proteins [BR:
pmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pmen_3729
DNA repair and recombination proteins [BR:
pmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pmen_3729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABP86477
UniProt:
A4XYR1
LinkDB
All DBs
Position
complement(4115090..4115689)
Genome browser
AA seq
199 aa
AA seq
DB search
MESIAVIDFETTGVSPSQARATEIGVAIIEDGRIVDRYQSLMNSGAWVPPFIEQLTGISN
AMLRKAPPSEQVMNEVADFIGERPLLAHNASFDQKFWDAELARVRRRRSQPFACSLLLSR
RLLPEAPSHKLGNLNAWAGLPDTGRAHRALADAEMAANLTLHLFGLLRERHGRYQADHAF
LCQLQSLSAAKVRALLATA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtggaatccattgcagtaatcgatttcgaaaccaccggcgtgtcgccgagccaggcgcgc
gctaccgagatcggcgtggcgatcatcgaggacgggcgcatcgtcgaccgttaccagagc
ctgatgaacagcggcgcctgggtgccgccgttcatcgagcagctcaccggcatcagcaac
gccatgctgcgcaaggcgccaccgtcggagcaggtgatgaacgaggtggccgacttcatc
ggcgagcggccgctgctggcgcacaacgcgtccttcgaccagaagttctgggacgccgaa
ctggcgcgcgtgcgccggcgtcgttcgcagcccttcgcctgttcgctgctgctctcacgc
aggctgctgccggaggcgccgagtcacaagctgggcaacctcaatgcctgggccggcctg
ccggataccggccgtgcccaccgcgccctggccgacgccgagatggcggcgaacctcacc
ctgcatctgttcggcctgctgcgcgagcgtcatggccggtaccaggccgaccatgccttt
ctctgccagctgcagagtctctcggccgccaaggtgcgggcgctgctggccacggcttag
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