KEGG   Ectopseudomonas mendocina ymp: Pmen_3763
Entry
Pmen_3763         CDS       T00510                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
pmy  Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmy02048]
    Pmen_3763
Enzymes [BR:pmy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Pmen_3763
Prokaryotic defense system [BR:pmy02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Pmen_3763
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD Helicase_C
Other DBs
NCBI-ProteinID: ABP86511
UniProt: A4XYU5
LinkDB
Position
complement(4146404..4149061)
AA seq 885 aa
MKGFVDLSDRARRLWAKSGDGFGHGVLAHLLDVAAVAERMLAHEPASTLDWAAQALGLER
EHVARWVACLVGLHDFGKAIPGFQDKWLEGRQTDETLGLAFPARSLGVTDHACASAALLW
EHLPRRGVRHMLWIRHALQAISAHHGYNFNQTELNRGKPSFEPPAWNEARGELFEAYWGV
LAPPGAPQLEELAQPAVQWLAGLTSVADWIGSNPEWFPLGERHALLAEHHADACSRADQA
LQQIGWRPFQSLLTAPSTTDRLIGQIVQRPELTARPLQSEADRLLEGVRGPALLLVEAPM
GEGKTELAFLAHLRLQAANQHRGLYVALPTQATGNALFSRALTFLHGFAADTALDVQLVH
GGAALNEQVLKLRGIYGASGDSVASSAWFSQRRRPLLSPYGVGTVDQALFATLNVKHHFV
RLWGLSNRVVVLDEVHAYDTYTSGLIEALLRWLKALGSSVVLMSATLPVPRRDALLRAWG
VEVDEVPELAYPRLLLADERGLQGATCDSRPLSPIQLQAVAEDLDSLTAKAQLLVQQGGC
GALIVNTVDRAQNVYLKLKAELGDAMPLLLFHARFPADQRSEQERAVLARFGQGGERPAK
ALLIATQVAEQSLDIDFDFMLTDLAPVDLILQRAGRLHRHQRERPEAHRQAILYVAGLDP
AALPDLKSTAWEYVYEPYILGRTWALLSREQELHLPHDIDRLVQAVYDGENLPADLAETD
RAFIEDHAYGAYLGKRQTERMMALNVAVDPQAEPQNAYTQKNRGYEEGEEGLGLPNYTRL
GDDSVTLIPVHQVPGGWSLTPGGDAFDPDQLLSNALAKQLHVRQLKTSRPALVKHALGED
SPRAFSEHPLLRHLKPLLLTDGYLQIGRLTVRLDDELGLVYQRDA
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgaaaggattcgtcgatttaagcgaccgcgcccgccggctctgggccaagagtggtgat
ggcttcggtcacggtgtgttggcccatttgctggatgtagccgcggttgccgagcggatg
ctggcccacgagcctgcaagtacgttggattgggcggcccaggcgctggggctggaacgc
gagcatgtggcgcgttgggtcgcctgcctagtggggctgcatgactttggcaaggctatc
cccggctttcaggacaagtggcttgagggacggcaaaccgacgagacactggggctggcc
tttcccgctcgctcgctgggcgttaccgatcacgcctgcgcgagtgcggcgctgctctgg
gagcatctgccgcgtcggggtgtgcggcatatgctgtggattcgccacgccttgcaggcc
atcagcgcccatcatggttacaacttcaatcagacggaactcaaccggggcaagccatcg
ttcgagccaccggcctggaacgaggcgcgcggggaacttttcgaggcctactggggcgtg
ctggcgccaccgggggcgccgcagcttgaggagctggcgcagccagcggtgcagtggctg
gccggactgaccagcgtggccgattggatcggctcaaaccccgagtggtttccattgggc
gagcgccatgcgctgctcgccgaacaccatgccgacgcctgctcgcgcgctgatcaggcc
ttgcagcagataggttggcggccctttcagtcgctgctgactgcgccgtccacgacggat
cgcctgatcgggcagatcgtccagcgtccggagctgacggcgcgccccctgcaatccgag
gctgaccgcctactcgaaggggtgcgaggcccggcgctgctgctggtcgaggcgccaatg
ggcgagggcaagaccgaactggccttcctcgcccatctgcgtctgcaagcggccaaccag
catcgtggcctctatgtggcgctgccaacccaggccacgggcaatgcgctgttcagtcgc
gcgctgacctttctccacggcttcgccgccgacaccgcgctggatgtgcaactggtgcat
ggcggtgctgcgctcaacgagcaggtgctgaagctgcgtggcatttatggcgcatccggc
gacagcgtggcctcgtctgcctggttctctcagcgccgccgtccgttgctgtcgccctat
ggcgtcggcaccgtggatcaggcgctgttcgccacactcaacgtcaaacaccactttgtg
cgcctgtgggggttgagcaaccgggtggtggtgctcgatgaagtgcatgcctacgacact
tacaccagcggactgatcgaagcactgctgcgctggctcaaggcgctgggcagttcggtg
gtgctgatgagcgccaccttgccggtaccgcgccgcgatgcgttgctgcgcgcctggggc
gtggaggtggacgaggtacccgagctggcctatccgcgcctgctgctggccgacgagcgc
gggttgcagggcgctacttgcgactcacggccgttgtcgccgatccagctacaggccgtg
gcggaggatctcgacagcctcaccgccaaggcccagcttctcgttcagcagggcggctgt
ggggcgctgatcgtcaataccgtggatcgtgcgcagaacgtttacctcaagctcaaggcc
gagttgggcgatgcgatgcctctgctgctgtttcatgcgcgcttcccggcagatcagcgc
agcgagcaggagcgggcggtactggcgcgcttcggtcagggcggagagcgacctgccaag
gcattgctgatcgccactcaggtggccgagcagagcctggatatcgacttcgatttcatg
ctcaccgacctggcaccggtggacttgatcctgcagcgtgccggccgtttgcaccgccat
cagcgcgagcgccccgaagcgcatcggcaggcgatcttgtatgtagcaggtctcgacccc
gctgcattgcccgacctcaagagcaccgcctgggaatacgtctacgagccctacatcctc
ggccgcacctgggcgttgctatcgcgcgaacaggaactgcatctgccgcacgatattgac
cggctggtgcaggcggtttacgacggcgagaatctgccggccgatctcgccgagactgat
cgagcctttatcgaagatcatgcctatggcgcttacctgggtaagcggcagaccgaacgg
atgatggcgctcaacgtcgccgtcgatccgcaggccgagccgcagaacgcctacacccag
aagaatcggggctatgaggagggggaggaaggcctgggcctacccaactacacccgtctg
ggcgatgactccgtgaccctgattcccgtgcatcaggtgcccggtggctggagcctgacg
ccgggcggtgacgccttcgaccccgatcagctactgtccaatgcccttgccaagcaactc
cacgtccggcagctgaagacgtcgcgcccagcgctggtcaagcatgcgctgggcgaagat
tcaccccgcgcattcagcgagcatccgctgctgcgtcatctcaaaccgctgctgcttacc
gatggctacctacagataggtcgtttgacggtgcgtctggatgatgagttggggctggtc
taccagcgcgacgcttag

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