Ectopseudomonas mendocina ymp: Pmen_3779
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Entry
Pmen_3779 CDS
T00510
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmy03016
]
Pmen_3779
Enzymes [BR:
pmy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Pmen_3779
Transfer RNA biogenesis [BR:
pmy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Pmen_3779
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
DUF7379
Motif
Other DBs
NCBI-ProteinID:
ABP86527
UniProt:
A4XYW1
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All DBs
Position
4166581..4167960
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AA seq
459 aa
AA seq
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MCGHFLTTSDSAMTKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTEKPEEADVILLNT
CSIREKAQDKVFSQLGRWRELKQANPDLVIGVGGCVASQEGAAIRDRAPYVDVVFGPQTL
HRLPEMIDAARTTKTAQVDISFPEIEKFDRLPEPRVDGPSAFVSVMEGCSKYCTFCVVPY
TRGEEVSRPLADVLLEITQLTDKGVKEVTLLGQNVNGYRGATPDGRIADFAELLHAVAAL
DGIERIRYTTSHPLEFSDAIIAAHAEIPQLVKYLHLPVQSGSDRILAAMKRNHTALEYKS
RIRKLRAAVPDILISSDFIVGFPGETEKDFEQTMKLIEDVGFDFSFSFIYSSRPGTPAAD
LVDDTPDEVKKQRLAILQHRINQYGFENSRRMVGTVQRILVSDYSKKDPGMLQGRTEQNR
IVNFRCDNPRLIGQFVDVHIDDALPHSLRGTLLDASTVN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggtcattttttaaccacctcagacagtgccatgaccaagaagctctatatcgaa
acccacggttgccagatgaacgagtacgacagctcgcgcatggtcgacctgctgggcgag
catcaggctctggaggtcacggaaaaacccgaagaagccgacgtgatcctgctcaatacc
tgctcgatccgcgaaaaggcccaggacaaggtgttctcccagctcggccgctggcgcgag
ctgaagcaggccaaccccgatctggtgatcggcgtcggtggctgcgtggccagccaggaa
ggcgcggcgattcgcgaccgtgcgccctatgtcgacgtggtattcggcccgcagaccctg
caccgcctgccggagatgatcgacgccgctcgcaccaccaagaccgcccaggtggacatt
agcttccccgagatcgagaaattcgaccgcctacccgagccgcgcgtcgatggtcccagc
gccttcgtctcggtgatggaaggctgcagcaagtactgcaccttctgcgtagtgccctac
acccgtggcgaggaagtcagccgcccgctggccgatgtgctgctggaaatcacccaactc
actgacaagggcgtcaaggaagtcaccctgctcgggcagaacgtcaacggctatcgcggt
gcgacgccggacggtcgcatcgccgatttcgccgagctgctgcatgcggtggcggccctc
gacggtatcgagcgcatccgttacaccaccagccacccgctggagttctccgacgccatc
atcgccgctcacgccgagattccgcagctggtcaaatacctgcacctgccggtgcagtcc
ggctcggatcgcatcctcgcggcgatgaagcgcaaccacaccgccctggaatacaagtcg
cgcatccgcaagctgcgcgccgccgtgccggacattctgatcagctcggacttcatcgtc
ggcttccccggcgagaccgagaaggacttcgagcagaccatgaagctgatcgaggacgtc
ggcttcgacttttccttctccttcatctacagctcgcgccccggcacgccggccgccgac
ctggtcgacgacaccccggatgaagtgaagaagcagcgcctggccatcctccagcaccgc
atcaaccagtacggtttcgagaacagccgacgcatggtcggcacggtgcagcgcatcctg
gtcagcgactactcgaagaaggacccgggcatgctccagggccgcaccgagcagaaccgc
atcgtcaatttccgctgcgacaatccgcgcctgatcggccagttcgtcgatgtgcacatc
gacgacgccctgccccattcgctgcgcggcaccctactggatgccagcaccgtcaactaa
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