Ectopseudomonas mendocina ymp: Pmen_3788
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Entry
Pmen_3788 CDS
T00510
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy03030
DNA replication
pmy03430
Mismatch repair
pmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pmen_3788
03430 Mismatch repair
Pmen_3788
03440 Homologous recombination
Pmen_3788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmy03032
]
Pmen_3788
03400 DNA repair and recombination proteins [BR:
pmy03400
]
Pmen_3788
Enzymes [BR:
pmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pmen_3788
DNA replication proteins [BR:
pmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pmen_3788
DNA repair and recombination proteins [BR:
pmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pmen_3788
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
ABP86536
UniProt:
A4XYX0
LinkDB
All DBs
Position
4176887..4177915
Genome browser
AA seq
342 aa
AA seq
DB search
MKLAPAQLGKHLQGTLAPVYAISGDEPLLCQEAADAVRNACRQQGFSERQVFNAEANFDW
GNLLQAGASLSLFAEKRLLELRLPSGKPGDKGTAALLEYLGRPPEDTVLLLSLPKLDGST
QKSKWAKALIDGQVSQFIQIWPVDANQLPQWIRQRLAQAGLSASADAVEMIAARVEGNLL
AAAQEVEKLKLLAEGNQVDAETVQAAVADSARFDVFGLIDCALAGDAAHALRVLEGLRGE
GVETPVILWALAREIRLLAGIAHQQSQGIPLDKAFASARPPVWDKRRPLVSKALQRHSSK
RWGQLLQQAQLIDAQIKGQAPGDPWSDLALLTLQLAGQRLRL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgcccccgcgcaactcggcaaacacctgcaaggcacgcttgcccctgtctac
gccatcagcggggacgagccactgctctgccaggaagccgccgacgccgttcgcaacgcc
tgccgccagcagggcttcagcgaacgccaggtattcaacgccgaagccaacttcgactgg
ggcaacctgctgcaggccggcgccagcctttcgctgttcgccgaaaaacgcctgctggaa
ctgcgcctgccctccggcaagccaggcgacaagggcacggcggccctgctcgaatacctg
ggccggccgcccgaggacacagttctgctgctcagcctgcccaagctcgacggcagcacg
cagaaatccaaatgggccaaggccctgatcgacggccaggtgagccagttcatccagatc
tggccggtggacgccaaccagctgccgcaatggattcgccagcgcctggcccaggccggc
ctgagcgccagcgccgatgcggtggaaatgatcgccgcacgcgtcgaaggcaacctgctg
gccgccgcccaggaagtggaaaagctcaagctgctcgccgaaggcaaccaggtggatgcg
gagaccgtgcaagccgccgtggccgacagcgcccgcttcgacgtgttcggcctgatcgac
tgcgccctggctggcgacgcggcgcatgccctgcgcgtcctcgaagggctgcgcggcgag
ggcgtggaaacgccggtcatcctctgggctctggcgcgcgagattcgtctgctggctggc
atcgcccaccagcagagccagggcatcccgctggacaaggccttcgccagcgcccgccct
cccgtctgggacaaacgccgcccgctggtttccaaagccctgcaacgccacagcagcaaa
cgctggggccagttgctgcagcaggcgcagctgatcgacgcgcagatcaagggccaggcg
cccggtgatccctggagcgatctggcactgctgaccctgcaactggccggtcaacgcctg
cgcctgtaa
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