Pseudomonas mendocina ymp: Pmen_3798
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Entry
Pmen_3798 CDS
T00510
Name
(GenBank) cell elongation-specific peptidoglycan D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00550
Peptidoglycan biosynthesis
pmy01100
Metabolic pathways
pmy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pmen_3798
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pmen_3798
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmy01011
]
Pmen_3798
Enzymes [BR:
pmy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pmen_3798
Peptidoglycan biosynthesis and degradation proteins [BR:
pmy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pmen_3798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
ABP86546
UniProt:
A4XYY0
LinkDB
All DBs
Position
complement(4186392..4188284)
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AA seq
630 aa
AA seq
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MPQPIRLKDHEKDARLVKRRVVFCAVAIIVLTCLLIMRMYYLQVVQYEYHSTLAENNRIH
VQPIPPTRGLIFDRNGVIIADNRPSFSLTVTRERAGDWLSVLDTVVEVLELSADERALFE
RRVRQGRRPFEPVPILFELSEEQIARIAVNQFRLPGVEVAAQLVRHYPQQEHFAHSVGYV
GRINEQELKRLDPTDYAGTHHIGKTGIERFYEDELHGEVGYEEVETNARGRVLRVLNRID
PKPGKDIVLSLDVHLQEAAENALGGRRGAVVAIDPNNGEVLAMVSQPSFDPNPFVTGISF
KAYGELRDSIDQPLYNRVLRGLYPPGSTIKPMVAVAGLDAGVVTPTSRVFDPGFYQLPNH
SHKYRNWNRTGDGWVDLNLAIARSNDTYFYDLAHKMGVDRMHDYMSRFGLGQRVALDMFE
ETAGLMPSRDWKRARYRQPWYPGETLILGIGQGYMQTTPLQLAQATALMATRGKWIRPHL
AKSVDGRLPVDPNPMPDIVLRDPKFWEYGIRGMEDVLHGARGTARKVGESSVYRIAGKSG
TAQVVAIKQGEKYDRNKVQERHRDHALFVAFAPVENPQIAVAVMVENGESGSGVAAPVVK
QVMDAWLLDQQTGQLKAEFAQPKNAEVSQR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgattcgtctcaaggatcatgaaaaggacgcccgcctggtcaagcgccgg
gtggtgttctgtgctgtggcaatcatcgtgctcacctgcctgctgatcatgcgcatgtac
tacctgcaggtggttcagtacgagtatcactccacgctggccgagaacaaccgcatccac
gtgcagccgattccgccgacgcgcgggctgatcttcgaccgtaacggggtgatcatcgcc
gacaaccgaccgagcttcagcctgaccgttacccgcgagcgtgccggcgactggctgagc
gtgctcgataccgtggtcgaggtactggagctttccgcggacgagcgcgcgctgttcgag
cgccgcgtgcgccaggggcggcggcccttcgagccggtgccgatcctgttcgagctgtcc
gaggagcagatcgcccgcatcgcggtcaaccagttccgcctgcccggcgtcgaggtggcg
gcgcagctggtgcggcattatccgcagcaggagcacttcgctcattcggtcggctatgtc
ggtcgcatcaacgagcaggaactcaagcgtctcgatccgaccgactacgccggcacccac
catatcggcaagaccggcatcgagcgcttctacgaagacgagctgcacggcgaagtgggt
tacgaagaagtcgagaccaacgcccgtggccgcgtactgcgggtgctcaatcgcatcgac
ccgaagccgggcaaggacatcgtcctgagcctcgacgtgcacctgcaggaggccgccgag
aacgccctgggcggccgccgcggtgcggtggtggcgatcgacccgaacaacggcgaggtg
ctggcgatggtcagtcagcccagcttcgatcccaaccccttcgtcaccggcatcagcttc
aaggcctatggcgagctgcgcgactcaatcgaccagccgctgtacaaccgcgtgctgcgc
ggcctctatccgccgggctcgaccatcaagccgatggtcgccgtggccggcctcgatgcc
ggcgtggtcacgcccacctcgcgggtgttcgacccaggcttctatcagttgcccaatcac
agccacaagtaccgtaactggaaccgtaccggtgacggctgggtcgatctcaacctggcc
atcgcccgttccaatgacacctacttctacgatctggcgcacaagatgggcgtcgatcgc
atgcacgactacatgagccgcttcggcctcgggcagcgcgtggcgctggacatgttcgag
gaaaccgcgggcctgatgccctcgcgcgactggaagcgggcgcgttatcgccagccctgg
taccccggcgaaaccctgattctcggtattggccagggctacatgcagaccacgccgctg
cagctggcgcaggctaccgcgctgatggccacccgcggcaagtggatacgtccgcacctg
gccaagagtgtcgatggccgcctgcccgtagacccgaatcctatgccggatatcgtgctg
cgcgatccgaagttctgggaatacggcatccgcggcatggaagatgtgctgcacggtgcc
cgcggcaccgcgcgcaaggtcggcgagagttcggtctatcgcatcgccggcaagagcggt
accgcgcaggtggtggcaatcaagcagggcgagaagtacgaccgcaacaaggtccaggag
cgccaccgcgaccacgcgctgttcgtcgccttcgccccggtggagaacccgcagatcgcc
gtggcggtgatggtggagaacggtgaatccggctctggcgtcgccgcgccggtggtcaag
caggtgatggacgcctggttgctggatcagcagacgggccagctcaaggccgagttcgcg
cagccgaagaacgccgaggtcagtcagcgatga
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