Ectopseudomonas mendocina ymp: Pmen_3840
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Entry
Pmen_3840 CDS
T00510
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pmen_3840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmy03400
]
Pmen_3840
Enzymes [BR:
pmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Pmen_3840
DNA repair and recombination proteins [BR:
pmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Pmen_3840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
ABP86587
UniProt:
A4XZ21
LinkDB
All DBs
Position
4228607..4229005
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AA seq
132 aa
AA seq
DB search
MRTIVFYRRARCARRTLRRVQYRTTSAGPLICPRSAALLVSRPFLRCPRPAAMARKKAAP
DFEHSLAELQTLVERLESGELSLEDSLTAFEQGIGLTRECQAALAQAEQKVQILLERDGE
LEPAPFDADPTA
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccatcgttttctatcgccgagcccggtgcgcacggcgcaccctacgccgagtc
cagtaccggacaacatccgcgggcccgctgatttgcccgagaagcgcggctctgctagtg
tcgcgaccgtttctacgctgcccgagacccgccgccatggcccgcaagaaagccgccccc
gacttcgaacactccctcgccgaactgcagacgctggtcgagcgcctggagagcggcgag
ctgtcgctggaagactcgctgaccgccttcgagcagggcatcggcctgacacgcgagtgc
caggccgccctggctcaggccgagcagaaggtgcagatccttctggaacgcgatggcgag
ctggaaccggcgcccttcgacgcggacccgaccgcatga
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