Ectopseudomonas mendocina ymp: Pmen_3845
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Entry
Pmen_3845 CDS
T00510
Name
(GenBank) TonB-dependent receptor, plug
KO
K16092
vitamin B12 transporter
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmy02000
]
Pmen_3845
Transporters [BR:
pmy02000
]
Other transporters
Pores ion channels [TC:
1
]
Pmen_3845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABP86592
UniProt:
A4XZ26
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All DBs
Position
4236609..4238495
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AA seq
628 aa
AA seq
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MKLSRLALAIAVLPGFALAAEPYTAEPLVITSGRQAEPLRQATAATTVFERADIERLQAS
SVPDLLSRVPGVSIVQNGGRGSLTSLFLRGANANQTLVLVDGVRLNAAASGLARLEFLSP
EQIERIEVVRGPRSALYGADAIGGVIQIFTRQGEAGLQPRLRLAAGSQQSFERSLGLSGG
DQHTRFDLGASLAERAGFDRSQDARGNDGDHDGLRRKSFNLSLEHRFSERLKGGLSLVDQ
RGESEYDDLFSFAPGNPSERFSVSTAAAHLEAQLAERWSSRLELGHSEDKSDNRDPLNAD
NNYSFNTYRDSAAWLNTLRLDEANQLLLGLDWFEDRLSTDSDFSQSERWNQAAFVQHRHR
GDGFATELGLRHDKNEQFGSENTWNAALSLDLAERLELLLSYGEGFHAPTFNDLYYPTSA
FYGGNPNLAPERSKTYEAQLRGDHLSTRWSVSAYRTEVEDLITVVSDPVTFFSTPMNVNQ
ARLQGLELSLEREVLGWQAVLGASLLDPRDRDSGHTLPRRAKRSLSLDLDRQFGAFAAGI
TWQAFSGRYDDAANTREIAGYGLLGARASWRMSDELLWQIKVDNILDKDYSQALYSRPND
PFFSSVNYYGYREEGRSALLSLSWTPQL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtcccgtctggctctggccattgccgttctgcccggcttcgccctggctgcc
gaaccctataccgccgagccgctggtgatcacctccggccgccaggccgagccgctgcgc
caggccactgctgccactacggtgttcgagcgggcggatatcgagcgtttgcaggccagc
agcgtgcccgatctgctcagccgcgtacccggcgtatccatcgtgcagaacggcggccgt
ggcagcctgaccagcctgtttctgcgtggtgccaacgccaaccagaccctggtactggtc
gacggcgtgcgcctgaacgccgctgcaagcggtctggcccgcctggaattccttagcccc
gagcagatcgagcgcatcgaggtggtgcgcggcccacgttcggcgttatacggcgccgac
gccatcggcggggttatccagatattcacccgccagggcgaagccggtctgcagccgcgg
ctgcgcctggccgccggcagtcagcagagtttcgaacgcagcctgggtctgtccggcggc
gatcagcacacccgcttcgatctcggcgccagtctggccgaacgtgccggcttcgaccgc
tcgcaggatgcccgtggcaacgacggcgaccacgacggtctgcgccgcaagtcattcaat
ctgagcctggaacatcgcttcagcgagcgcctcaagggcggcctaagcctggtagaccag
cgcggcgagagcgaatacgacgatctgttcagcttcgcgccgggcaaccccagcgagcgc
ttcagtgtttccactgctgccgcgcatctcgaagcgcagctcgccgagcgctggagcagc
cgtctggaactcggccatagcgaggataagagcgacaaccgcgacccgctgaacgccgac
aataactacagcttcaacacctaccgcgacagcgccgcctggctcaataccttgcgtctg
gacgaggccaaccagctgctgctgggcctcgactggttcgaggaccgtttgagcacggac
agcgacttcagccagagcgagcgctggaatcaagccgccttcgtccagcaccgccatcgc
ggcgacggtttcgctaccgagctgggcctacgccacgacaagaacgagcaattcggcagc
gagaacacctggaacgcggcactgagccttgacctggccgaacgactggaactactgctg
agctatggcgagggttttcacgcccccaccttcaacgatctgtactaccccaccagcgcc
ttctatggcggcaatccgaacctcgcgcccgagcgctcgaaaacctacgaggcgcaattg
cgcggcgatcacctgagtacccgctggagcgtgtcggcctaccgcaccgaggtcgaagac
ctgatcaccgtggtcagcgacccggtaaccttcttcagcacgccgatgaacgtcaaccag
gcgcgcctgcaaggcttggaactgagcctggaacgcgaggtgctgggctggcaggccgta
ctcggcgccagtctgctcgacccacgtgatcgcgacagcggccataccctgccgcgccgc
gccaaacgcagcctgagcctggacctggatcgccagttcggcgccttcgccgctggcatc
acctggcaggccttctccggtcgctatgacgacgccgccaacactcgagagatcgccggc
tacggtttgctcggtgcgcgtgcgagctggcggatgagcgatgagctgctgtggcaaatc
aaggtcgacaacatcttggacaaggactattcccaagctctgtatagccgaccgaacgat
ccgttcttcagcagcgtgaactattacggctatcgcgaggaaggccgcagcgccctgctc
tctctgagctggacaccgcaactttga
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