Ectopseudomonas mendocina ymp: Pmen_3882
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Entry
Pmen_3882 CDS
T00510
Name
(GenBank) transporter, NhaC family
KO
K18218
tetracycline resistance efflux pump
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmy02000
]
Pmen_3882
01504 Antimicrobial resistance genes [BR:
pmy01504
]
Pmen_3882
Transporters [BR:
pmy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Pmen_3882
Antimicrobial resistance genes [BR:
pmy01504
]
Gene variants
Tetracycline resistance genes
Transporters
Pmen_3882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
ABP86629
UniProt:
A4XZ63
LinkDB
All DBs
Position
complement(4271694..4273073)
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AA seq
459 aa
AA seq
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MSEPTALSLIPPAVVLTLAIWLRRPILALLIGACSGLLLLSPQDALGSFAEISLKVMQDE
TIGWLILVCGSFGALIALLVRTGGALAFGRSALKLAKGRRSSLLMTFVLGVVIFVDDYLN
ALTVGETMKRVTDRFRISREKLAYVVDSTAAPICVLVPLSTWAVFFGGLLENNGIAETGQ
GINVYIQAIPYMLYAWAAVLLVVLVAAGLFPDIGPMRKAELQARHGSAGAMHVGELSPEH
NYSMKSLEEEFEGADKESGKLHNFLVPLAMLVGFTVYFDIDVWMGMIATMLLTLPFYLVQ
RLMPLSEMLDQMVDGFKTMLPAIGICVAAFVFKDVCDQLMLPQYVVETLKPYMTPQMLPA
MVFLCMAVLSFATGSSWGIFAVTIPIVMPLAYALGADIPLVIGALMSASAFGSQACFYSD
STVLAAQGSGCNLISHAITQLPYTLVAAGLAFVGFILVA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacctactgctctgagtcttatcccgcctgccgttgtcctgaccctcgccatc
tggctgcgtcgccccatcctcgccttgctgatcggcgcctgcagcggcctgctgctgctt
tcgccgcaggatgcgctgggcagcttcgcggaaatttccctcaaggtgatgcaggacgaa
accatcggctggctgatcctggtgtgcggcagcttcggcgcactcatcgccctgctggtg
cgtaccggtggcgcgctggccttcggccgcagcgcactgaagctggccaaggggcgccgc
tcttcgttgctgatgaccttcgtgctcggcgtggtgatcttcgtcgacgactacctcaat
gccctgacggtgggcgagaccatgaagcgcgtcaccgaccgcttcagaatctcccgcgag
aagctggcctacgtggtcgactccaccgccgcgccgatctgcgtgctggtgccgctgtcc
acctgggcggtgttctttggcggcctgctggagaacaacggcatcgccgagaccggtcag
ggcatcaacgtgtatatccaggccattccctacatgctctatgcctgggccgcggtgctg
ctggtggtgctggtggccgccgggctattcccggacatcgggccgatgcgcaaggccgag
ttgcaggcgcgccacggttctgccggtgccatgcacgttggcgagctgagccccgagcac
aactactcgatgaagtcgctggaggaggagttcgaaggcgccgacaaggagagcggcaag
ctgcacaacttcctggtgccgctggccatgctggtcggcttcaccgtgtatttcgacatc
gacgtgtggatgggcatgatcgccaccatgctgctgaccctgccgttctatctggtgcag
cgcctgatgccgctgtcggagatgctcgatcagatggtcgacggcttcaagaccatgttg
ccggccatcggcatctgcgtggcggccttcgtgttcaaggacgtctgcgatcagctgatg
ctgccgcagtacgtggtcgagacgctcaagccctacatgacgccgcagatgctgccggcc
atggtgttcctgtgcatggcggtgctgagcttcgccaccggctcgtcctggggcatcttt
gccgtgaccatccccatcgtcatgcctctggcctatgcgctgggggcggacattccgctg
gtgatcggcgcgctgatgtcggcctcggccttcggcagccaggcctgcttctacagcgac
tccacggtgctggcggcgcagggctcgggctgcaatctgatcagccacgccatcacccag
ctgccctacaccctggtggctgccggtctggctttcgtgggtttcatcctcgtcgcctga
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