Ectopseudomonas mendocina ymp: Pmen_4172
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Entry
Pmen_4172 CDS
T00510
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pmy
Ectopseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmy03021
]
Pmen_4172
Transcription machinery [BR:
pmy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pmen_4172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ABP86919
UniProt:
A4Y003
LinkDB
All DBs
Position
complement(4574881..4575735)
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AA seq
284 aa
AA seq
DB search
MSTSLQPVHALVPGANLEAYVHAVNSIPLLTPEQERELAESLYYQQDLEAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIRAEIHEFILK
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVTAVAESLGVEPHEVREMESRLTGQD
MAFDPASDADDDSAFQSPAHYLEDHRYDPARQLEDADWSDSSSSNLHEALESLDERSRDI
LYQRWLAEEKATLHDLAAKYNVSAERIRQLEKNAMNKLKGSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttccttgcaacctgttcatgctttggttccgggcgccaacctggaagcatac
gtgcatgccgtcaacagcatcccgttgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatcagcaggatctcgaggccgcccgccagatggtgctggcccacctgcgt
ttcgtggtgcatatcgcccgcagctactctggttatggtctggcccaggccgacctgatc
caggaaggcaacgtcggcctgatgaaggcggtcaagcgcttcaacccggaaatgggcgtg
cgtctggtgtccttcgccgtgcactggatccgtgccgaaatccacgagttcatcctgaag
aactggcgcatcgtcaaggtggccaccaccaaggcgcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgacgaagtcaccgccgtggccgag
agcctgggcgtcgagccgcacgaagtgcgcgagatggaaagtcgtctgaccggccaggac
atggccttcgacccggccagcgatgccgacgacgacagcgccttccagtcgccggcgcac
tacctggaagaccaccgctatgacccggcccgccaactcgaggatgccgactggagcgac
agttccagcagcaacctgcacgaagcattggaaagcctggacgagcgcagccgtgacatc
ctctaccagcgctggctggccgaggagaaggcgacgctgcacgacctggccgccaagtac
aacgtgtcggccgagcgtatccgccagctcgagaagaacgcgatgaacaagctcaagggc
tcgattgccgcctga
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