Ectopseudomonas mendocina ymp: Pmen_4221
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Entry
Pmen_4221 CDS
T00510
Name
(GenBank) L-threonine ammonia-lyase
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy00260
Glycine, serine and threonine metabolism
pmy00290
Valine, leucine and isoleucine biosynthesis
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
pmy01200
Carbon metabolism
pmy01230
Biosynthesis of amino acids
Module
pmy_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
pmy_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pmen_4221
00290 Valine, leucine and isoleucine biosynthesis
Pmen_4221
Enzymes [BR:
pmy01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
Pmen_4221
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Gene cluster
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Motif
Pfam:
PALP
Thr_dehydrat_C
DUF3335
Motif
Other DBs
NCBI-ProteinID:
ABP86968
UniProt:
A4Y052
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Position
complement(4625865..4627379)
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AA seq
504 aa
AA seq
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MLEQYVKKILTSRVYDVAVETPLQPARQLSERLGSQILLKREDLQPVYSFKIRGAYNKLA
QLSAEELARGVVTASAGNHAQGLALAAKHLGVKATIVMPRTTPELKVQGVRSRGGKVVLH
GDAFPEALAHSLKLVEEKGYTYIHPYDDPLVIAGQGTVAMEVLRQHQGHIDAIFVPVGGG
GLIAGIAAYVKYLRPEIKVIGVEPDDSNCLQAAMAAGERVVLPSVGLFADGVAVAQIGQH
TFDICKQHVDEVITVSTDEICAAIKDIYDDTRSITEPAGALAVAGIKKYVERQGANGEVL
VGIDSGANVNFDRLRHVAERAELGEKREAIIAVTIPEQPGSFKAFCEAVGKRQITEFNYR
YHTDREAHIFVGVQTHPENDPRQALVEGLRAQGFPVLDLTDNELAKLHIRHMVGGHAAQV
SDEMVLRFEFPERPGALFNFLQKLGGRWNISMFHYRNHGAADGRVVAGLQVPADERHLVP
AALDAIGYPYWDESDNPAYRLFLG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacagtacgtgaagaagatcctcacctcgcgcgtttacgacgtcgcggtggaa
accccgctgcaacccgcccgccagctcagtgagcggctgggcagccagattctgctcaag
cgcgaggatctgcagccggtgtactcgttcaagattcgcggcgcctacaacaagctggcg
cagctctcggccgaagaactggcgcgcggcgtggttaccgcctcggccggcaaccacgcc
cagggtctggcactggcggccaagcacctgggggtgaaggcgaccatcgtcatgccgcgc
accacgccggagctgaaggtgcagggcgtgcgttcgcgtggcggcaaggtggtgctgcac
ggcgatgccttccccgaggcgctggcgcattcgctgaaactggtggaggagaagggctac
acctacattcacccctacgacgatccgctggtgatcgccgggcagggcaccgtggccatg
gaggtgctgcgccagcaccagggccatatcgacgccatcttcgtgccggtcggcggcggc
ggcctgatcgccggcatcgccgcctacgtcaaatacctgcgcccggaaatcaaggtgatc
ggcgtcgagccggacgactccaactgcctgcaggccgccatggccgcgggtgagcgcgtg
gtgctgccgagcgtcgggctgttcgccgacggcgtggcagtggcgcagatcggccagcac
accttcgacatctgcaagcagcatgtcgacgaggtgattaccgtcagcaccgatgaaatc
tgcgcggcgatcaaggacatctacgacgacacccgctcgatcaccgagccggccggcgcg
ctggcggtggccggcatcaagaagtacgtcgagcgccagggcgccaatggcgaagtgctg
gtgggcatcgattcgggcgccaacgtcaacttcgaccgtctgcgccacgttgccgagcgc
gccgaactgggcgagaagcgcgaggcgatcatcgccgtgaccatccccgagcagccgggc
agcttcaaggccttctgcgaagcggtgggcaaacgccagatcaccgagttcaactaccgc
taccacaccgaccgcgaggcgcacatcttcgtcggcgtgcagacccacccggagaacgac
ccacgccaggcgctggtcgagggcctgcgcgcgcagggcttcccggtgctggacctgacc
gacaacgagctggccaagctgcatatccgccatatggtcggtggccatgcggcgcaggtc
agcgacgagatggtgctgcgcttcgagtttcccgagcgccccggcgcgctgttcaacttc
ctgcagaagctcggcgggcgctggaacatctccatgttccactaccgcaaccacggcgcc
gccgatggccgtgtggtcgccggcctgcaggtgcccgccgacgagcgccacctggtaccc
gcggcgctggacgccatcggttacccctactgggacgagagcgacaacccggcttatcgc
ctgtttctcggctga
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