Ectopseudomonas mendocina ymp: Pmen_4419
Help
Entry
Pmen_4419 CDS
T00510
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
pmy
Ectopseudomonas mendocina ymp
Pathway
pmy02020
Two-component system
pmy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pmen_4419
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pmen_4419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pmy02022
]
Pmen_4419
02035 Bacterial motility proteins [BR:
pmy02035
]
Pmen_4419
Two-component system [BR:
pmy02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Pmen_4419
Bacterial motility proteins [BR:
pmy02035
]
Flagellar system
Flagellar assembly proteins
Others
Pmen_4419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA_16
AAA
AAA_22
HTH_30
HTH_1
AAA_7
AAA_19
AAA_3
HTH_24
TIP49
Response_reg
ATPase
Motif
Other DBs
NCBI-ProteinID:
ABP87166
UniProt:
A4Y0Q0
LinkDB
All DBs
Position
complement(4840344..4841753)
Genome browser
AA seq
469 aa
AA seq
DB search
MKHSTQTVSYACDELFDEQLGQQHIVVVGQADAASERLLTGGLQRRGFPVRRFASCLELD
PAALEGASLVLVFVSSLAGNTLYAQVGAILRQASRVGVVPVVEYADQEKAAALLELGCVD
YLLAPFSEAQLSALLRRQESASAGEEGFVSCSQAGRRLLAMAQRVAMTRAPILITGETGT
GKELMARYIHRFSAQDDAPFIAVNCAAIPEQMLESILFGHEKGAFTGAVSAQPGKFELAN
GGTLLLDEIGELPLGLQAKLLRVLQEQRVERLGGRREIALDVRIIAATNRDLQQEVAEGR
FRADLMFRLDVLPLHISPLRERKEDVLPLARRFIRQYAPQDARHELLTEDACRALLAYDW
PGNVRELENCLQRALILRNGLYIQAQDLGLSVPVSSAPESTPRLQPQLLEGGKAALRASG
KWAEYQHVIDTIRRFGGHKTKAAESLGMTPRALRYRLNAMREQGVQIPV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcactcaactcaaacggtaagttacgcctgcgacgagctgttcgatgaacagctg
gggcagcaacatatagtcgtggtcggtcaggccgatgccgccagcgagcgtctgctgacc
ggcggcctgcagcgtcggggctttcctgtccgtcgtttcgccagttgcctggagctggat
ccggccgcgctggaaggtgccagcctggtgctggtgttcgtcagcagcctggccggcaat
acgctgtatgcccaggtgggcgccattctgcgtcaggccagccgcgtcggcgtggtgccg
gtggtcgaatacgccgatcaggaaaaagccgcggcgctgctcgagctgggctgcgtcgat
tatctgctggcgccgttcagcgaggcccagctcagtgcactgctgcgtcgccaggagtcg
gccagcgcaggcgaggagggcttcgtttcctgctctcaggccggccgccgtctgctggcc
atggcccagcgcgtggccatgacccgtgccccgatcctcatcaccggcgagaccggcacc
ggcaaggagctgatggcgcgctacatccaccgcttctcggcgcaggacgatgcgcccttc
attgccgtgaactgcgcggctatccctgaacagatgctcgaatccatcctgttcggccac
gagaagggcgcctttaccggtgcggtcagcgctcagccgggcaagttcgaactggccaac
ggcggcaccctgctgctcgacgaaatcggcgagttgccgctggggctgcaggccaagctg
ctgcgggtgctgcaggagcagcgcgtcgagcgcctgggcgggcgccgtgaaatcgctctg
gatgtgcgcatcatcgccgccaccaaccgtgacctgcagcaggaagtggccgaaggccgt
ttccgcgccgacctgatgttccgcctcgatgtgctgccgctgcacatcagcccgctgcgc
gagcgcaaggaagacgtgctgccgctggcgcgccgcttcattcgccagtacgcgccgcag
gacgcgcgccacgaactgctgaccgaagatgcctgccgcgcgctgctggcctatgactgg
ccgggcaacgtgcgcgaactggagaactgcctgcagcgtgcgctgattctgcgcaatggc
ctgtatatccaggctcaggacctgggcctgagcgtgcccgtgagcagcgcgccggagtcg
acgccgcgcctgcagccgcaactgctggagggcggcaaggcggccctgcgcgccagtggc
aagtgggccgagtaccagcacgtgatcgacaccatccgccgtttcggcgggcacaagacc
aaggccgccgaaagcctcggcatgaccccgcgcgcgctgcgctaccgcctcaatgccatg
cgcgagcagggcgtacagattcccgtctag
DBGET
integrated database retrieval system
