Prevotella melaninogenica: HMPREF0659_A5002
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Entry
HMPREF0659_A5002 CDS
T01286
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pmz
Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HMPREF0659_A5002 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmz03019
]
HMPREF0659_A5002 (rnc)
03009 Ribosome biogenesis [BR:
pmz03009
]
HMPREF0659_A5002 (rnc)
03036 Chromosome and associated proteins [BR:
pmz03036
]
HMPREF0659_A5002 (rnc)
Enzymes [BR:
pmz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HMPREF0659_A5002 (rnc)
Messenger RNA biogenesis [BR:
pmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0659_A5002 (rnc)
Ribosome biogenesis [BR:
pmz03009
]
Eukaryotic type
90S particles
RNase
HMPREF0659_A5002 (rnc)
Prokaryotic type
rRNA processing factors
HMPREF0659_A5002 (rnc)
Chromosome and associated proteins [BR:
pmz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HMPREF0659_A5002 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ADK96075
LinkDB
All DBs
Position
I:complement(5784..6881)
Genome browser
AA seq
365 aa
AA seq
DB search
MVTMLVLYSRSMLNNIIDRIKLPFRKEKELYLSLYQIIGIIPHDISYYKTALLHKSVARR
NAKGKPVNNERLEFLGDAILDAIVGDIVYEHFPGKREGFLTNTRSKIVQRDTLNRLAKEM
GIGQLILSNGQTSSHNSYLGGNAFEALVGALYLDHGYNACMKFMKQQVLGKLINIDKVAY
KEVNFKSKLIEWSQKNKVNMEFKLIENQKDKQGSPTFHFQVIMEGIPCGEGHGYSKKESQ
QEASKLTLQRLRREPQFIDEVFAAKANRTKMEEEPVLNVPETSQDMNFIEGSEPKVEKHE
NPFQTEVFDEKSSAADEVKEELTDSSVEEEKKANNEDFDLSDISHSKSIDREAIIAAAEA
EAFEN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
gtggtcacaatgcttgtgttgtattcaagaagtatgctgaataatataattgatagaata
aagctccctttccgcaaggagaaggagctttatttgtctttgtaccaaattatcggcatt
attcctcacgatatcagttattataagactgcactcttgcacaagagcgtagcgcgtcgt
aacgcaaagggtaagccagtaaacaatgaacgccttgagtttcttggtgatgctattctc
gatgccattgtcggtgacatcgtttatgagcactttccaggcaagcgtgaaggtttcctg
accaatactcgttcaaagatagtacaacgcgatacgctaaaccgcctggcaaaagagatg
ggaatcggacagttgattctctctaacgggcagacgtcttcgcataacagttatttaggt
ggtaatgcttttgaggcactcgtaggcgctctctatcttgatcatggctacaatgcttgt
atgaagtttatgaagcaacaagtccttgggaagcttatcaatattgataaggttgcttac
aaggaggtgaacttcaagtcaaaactcatcgagtggagccagaaaaataaggtcaatatg
gagttcaagctgattgaaaaccaaaaggataaacagggtagtcctacttttcatttccaa
gtgatcatggagggtattccatgtggagagggacacggttattctaagaaggaaagccag
caagaggcttccaaacttacactccagcgtttgcgtcgtgagccccagtttatagatgag
gtttttgccgccaaagccaaccgtacaaagatggaagaagaaccagtgctcaatgttcct
gaaacttcacaggacatgaacttcattgaaggttctgaaccaaaggttgagaaacatgag
aatcctttccaaacagaggtctttgatgagaaatcatcggctgctgatgaagtgaaagaa
gaactaactgattcctctgttgaggaagaaaagaaggctaacaatgaggattttgacctc
tctgatatttctcattctaagtctattgaccgcgaagctattatcgctgctgctgaggca
gaggcttttgaaaattaa
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