Prevotella melaninogenica: HMPREF0659_A5036
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Entry
HMPREF0659_A5036 CDS
T01286
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz03030
DNA replication
pmz03410
Base excision repair
pmz03420
Nucleotide excision repair
pmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0659_A5036 (polA)
03410 Base excision repair
HMPREF0659_A5036 (polA)
03420 Nucleotide excision repair
HMPREF0659_A5036 (polA)
03440 Homologous recombination
HMPREF0659_A5036 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmz03032
]
HMPREF0659_A5036 (polA)
03400 DNA repair and recombination proteins [BR:
pmz03400
]
HMPREF0659_A5036 (polA)
Enzymes [BR:
pmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0659_A5036 (polA)
DNA replication proteins [BR:
pmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HMPREF0659_A5036 (polA)
DNA repair and recombination proteins [BR:
pmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HMPREF0659_A5036 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0659_A5036 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADK96443
LinkDB
All DBs
Position
I:complement(54269..57031)
Genome browser
AA seq
920 aa
AA seq
DB search
MVKLFLIDAYALIYRSYYAFIKSPRINSKGLNTSAVMGFCNTLNEVLTKEKPTHIGVAFD
HGKTFRHDAFPEYKAQREETPEDIKLSVPLIKQVLEAMHIPILQVDGFEADDIIGTIATR
FGADGIDTFMLTPDKDYGQLIGPNVFMYRPRHGGGYEILGEKEVGEKYGIPTPAQVIDLL
ALMGDSADNFPGCPGVGEKTAAKLINQFGSIDNMLQHTDEIKGKLREKVENAVEDIKMSK
FLATIRTDVPMQLDLDELKVEQPDETKLRAIFEELEFKTLINKFLNKAESKPKTDNNQLD
LFAENTTNESDEPKNAKFESIKTTQHEYKLVENEEELRQLCDFFITKESVSIDTETTSTD
AISAELVGLSFSVEEKKAFYVAVPANYEEALKIVQIFKPLYESDKIMKIGQNIKYDYEVL
TRYGVTLQGKMFDTMIAHYLIQPELHHNMDYMAETLLGYQTIHIEELLGPKGKKQKNMRD
LSPTDIYEYAAEDADITLRLKNVLEPRLKELGVEELFWNIEMPLVRVLADMELNGVCLDT
EALQDTSKIFTERMKQYEQEIYKEAGEEFNISSPKQVGDILFGKLQIMDKPKKTKTGQYV
TSEEVLQSLESKSPIVRNILNYRGMKKLLSTYIDALPKLINPRTGHIHTSFNQALTATGR
LSSSDPNLQNIPVRTDDGKEIRKCFIPEDGCLFFSADYSQIELRIMAHLSEDENMMEAFR
EGHDIHRATAAKIWHVDIDKVTDAQRKKAKQANFGIIYGITTYGLAQRMDIPNGEAKELI
EGYFRTFPKVQVYMEHAKEVARAKGYAETLFHRRRYLADINSRNATVRGFAERNAINAPI
QGTEADIIKVAMVRIWERFKKEGIRSKMILQVHDELNFSVFPEEREQVERIVIEEMQNAY
PLNVPLIADAGWGKNWLEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaactcttccttattgacgcttatgcgctcatctatcgttcatactacgcattt
atcaaaagtccacgtatcaactctaagggcttgaatacatctgctgttatgggcttttgc
aacaccctgaacgaggttcttacaaaggaaaagccaacgcatattggtgtagcattcgat
catggaaagacttttcgccatgacgcatttcctgaatacaaggcgcaacgtgaggaaaca
cccgaagatatcaagctttctgttccacttatcaagcaagtgcttgaggcaatgcatatt
cctattctacaggtagatggcttcgaagcagatgatattatcggtactatagcaactcgc
tttggagccgatggaatcgatacttttatgcttacacccgataaagactatggtcaactc
attggtcctaacgtctttatgtatcgtcctcgccatggtggcggttacgagatattggga
gaaaaggaggtaggagaaaaatatggcatccctaccccagcccaagtcatcgacctattg
gcattgatgggcgactcagcagataactttcctggttgtcccggtgttggagagaaaacc
gcagccaagttaatcaatcagtttggaagcattgacaatatgcttcaacatactgacgag
attaagggtaaactacgtgagaaagttgagaatgccgtagaggatattaaaatgtcaaag
ttcctcgcaacgatccgaacagacgttccaatgcaacttgacttggatgaactcaaggtt
gaacagcctgacgagaccaaattgcgtgcgatatttgaggaattggagtttaagacactt
attaacaagtttcttaacaaagctgaatcaaagccaaaaactgacaataatcagcttgat
ttatttgcagaaaacacgaccaacgagtcagatgagccgaaaaatgcgaaatttgagagc
ataaaaacgacccaacatgaatacaaactcgttgaaaatgaggaagaattacgacagctt
tgtgacttttttattacaaaagagtctgttagtatagacacagaaaccacatctacggat
gcaattagtgctgaattggttggtttgagcttctcggttgaagaaaagaaggctttttat
gttgccgtaccagccaactatgaagaagcgttaaaaatcgttcagatattcaaaccgctg
tatgaaagcgacaaaataatgaaaatcggacagaacattaagtatgactatgaagtgtta
accagatatggagtgacactacagggtaagatgttcgacacgatgatagcccactacctc
atccaaccagaactacatcataatatggactacatggctgaaaccttactcggctatcaa
accattcacattgaagaactactcggtccgaaaggaaagaagcagaagaatatgcgcgac
ctctcccctactgacatctatgagtatgctgcagaggatgccgacattaccttgcgtctg
aaaaacgtacttgaaccacgtttaaaggagcttggagtggaagaactcttctggaatata
gagatgcctttggtacgtgtattagctgatatggagctaaatggcgtatgcttagacact
gaagcactgcaagatacgtcaaagatattcactgaacgtatgaaacaatacgagcaggaa
atatataaggaggctggagaagaattcaatatctcaagcccaaaacaagtcggtgacatc
ctctttggcaagttgcaaattatggataagcctaagaagacaaagacaggacagtatgtt
acaagtgaagaggtgctgcagagccttgaaagcaagagtcctatcgtacgtaacatcctc
aattacagaggtatgaagaagcttcttagcacttatatagatgcccttccaaagctgatt
aatccacgtactggacatattcacacatcgtttaatcaggcacttacagccactggacga
ctctcttcgagtgatccaaacttacagaatattcctgtgcgtacggatgatggtaaggag
atacgtaagtgtttcattccagaagatggctgtctgttcttttctgcagattatagtcag
atagagttgcgtattatggcacatctttctgaagacgagaatatgatggaggctttccgt
gagggtcatgatatccaccgtgcaacagctgcaaagatatggcatgtagatatagataag
gtgactgatgcacagcgaaagaaggctaaacaagctaacttcggtattatatatggtatt
acgacctatggacttgcccagcgtatggacattccaaatggtgaagctaaagaactgata
gagggctatttccgcacattcccaaaggtacaagtatatatggaacatgcaaaagaagtg
gcaagagccaagggttatgctgaaacactgttccatcgtcgccgctatcttgctgatatc
aacagccgtaacgccactgtacgcggttttgctgagcgtaatgccatcaatgctccaata
caaggaacagaggcagatatcatcaaggtggcaatggttcgtatctgggaacgctttaag
aaagaaggtattcgttcaaagatgattctccaagtgcatgatgaacttaacttctccgtc
ttccctgaagagcgtgaacaggtggaacgcattgttatcgaggagatgcagaacgcttat
ccactgaatgtcccattgatagctgatgccggatggggcaagaactggttggaagcacat
taa
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