Prevotella melaninogenica: HMPREF0659_A5345
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Entry
HMPREF0659_A5345 CDS
T01286
Name
(GenBank) TonB-linked outer membrane protein, SusC/RagA family
KO
K02014
iron complex outermembrane recepter protein
Organism
pmz
Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmz02000
]
HMPREF0659_A5345
Transporters [BR:
pmz02000
]
Other transporters
Pores ion channels [TC:
1
]
HMPREF0659_A5345
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
Mtf2
Motif
Other DBs
NCBI-ProteinID:
ADK95711
LinkDB
All DBs
Position
I:complement(460235..463621)
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AA seq
1128 aa
AA seq
DB search
MNNKQNKAQALWRICMMALIWMFATELYAQNVTVSGIVKDPTGEPVIGASVTVKGTNMGT
VTNIDGQYTLQCPTKGTLVFSYLGMKPKNVDINGRQQINVALEEEATALNDVVVTALGIK
RQTKALGYAVTELKSDELERANTVSPVTALQGKVAGVEISQSDGGMFGSTKIQIRGASTL
NANNQPIFVVDGVILDNATSQSGDADWNSNINDYGNQLKNLNPDDFESVSVLKGAAATAL
YGSRGLNGAVVITTKSGKAGKGVTVKVSQTVGLETVYRSPDLQNTYMIGAFPGGVDYGDE
YTATGNLWSDNMTSFARNSKGEYSLIEQYGNYAWGPDISWAEGKQFEQYDGTMGTAKMFP
NNYKDAYDTGFNTNTNVSLQGGNDRTQFYASASYKYNKGTTPRNTFNRLSFLGKASQKIG
NIMTVDFSVNFTQSQPRNAPLNIGEYFANSTFPREYDVNRYRNLYKGEHGGLASERYGDL
YRAVPGKELWWSIFENDYKQTETMFRPVLNINIQALPWLQLSTGGSLNYYAIDGELKAPG
SGYANEGGSYALSHTHTTQENLYLAANLNYQINKDWEVHGFLREEYFNQYAQYNSESTNG
GLIVPNQFFIKNSKQQASFNAYKFNTKRIVSTIFMIGTSWKNQLFLDITGRNDWSSALVY
SYGTGNFSYFYPSVSGSWIITETFKDKLPKWVSFAKVRGSWAQVGNDTSPYYINSGYSVA
TYQRGDKKIYGMTIPENMKSTNLKPERKNAWEVGLDWRFFDSRIGVDLTYYKENTRNQIM
TINVPWESGVKEKLINAGNIQNSGIEIALNTTPIKKKQWQWDLNFTYTRNRNKIVELSPD
VTSYINLDGAANYGNYRIASVAKVGSDYGMLMSDSWIKTDEKTGKPVVGYTNKFRTVYYK
RGGTVKEVGSMLPNFLGSLNSTLRWKDLSLYVLFDARFGGYVASYNSRYATAYGFSGETE
KYRKGMTWTSKYANAQDKVFTDGFIPDVVFDAGTIVTTPGGTNQDVSGMTYQEAYEKGYV
EPAHLQSAAYFKNSWGTGVINDDWFKKINYIALREITLSYNVPTKISSYIGAKNLSLSFT
GRNLAYLLNTAPNHENPESVRGTGAAQFRMRSFMPYTASYLFTLNATF
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaagcagaacaaagcgcaagccttatggcgaatctgtatgatggcactgata
tggatgttcgctactgagctttatgcgcaaaatgtcacggttagtggcattgtgaaagac
ccaacgggcgagcctgtaatcggtgcttcggtaacggtgaaaggtacaaatatgggtact
gtgactaatatcgacgggcaatacaccctacaatgccccacaaaaggcacgttagtattc
tcatacttgggaatgaagcctaaaaatgtagatattaatggtcgacaacagataaacgtt
gcccttgaagaagaagccactgcgcttaatgatgtggtggttacggcattgggaattaaa
cgacaaacaaaagcattgggttatgctgtcaccgaactgaaaagcgatgaactggaacga
gccaacacggtttctcctgttacagcattgcaaggtaaggtggctggtgtagagatcagc
cagtcagacggtggaatgtttggttctactaaaattcaaataagaggtgcatctactctt
aatgccaacaaccaacctatctttgtagtagacggtgtgatattagataatgctacaagc
caatcaggggacgctgactggaatagcaatatcaacgactatggtaatcaactaaagaac
cttaaccccgacgactttgagagtgtaagtgtactaaaaggtgctgccgcaacagcatta
tatggttcacgtggtttgaatggtgctgtagtaattaccactaaaagtgggaaagcaggc
aaaggtgttactgtgaaggtttcgcaaacagtaggattagaaacagtctatcgttcacca
gatctacaaaacacttatatgattggtgctttccctggtggtgtagactatggagacgaa
tacaccgccacgggcaatctttggagcgataacatgacatcgttcgctcgtaactctaaa
ggtgaatactcgctcatcgaacaatatggtaactatgcttggggacctgatatctcatgg
gctgagggtaaacagtttgaacagtatgatggaacaatgggaacggcgaagatgttccca
aacaactataaagatgcttacgacacaggctttaataccaatacgaatgtatcattgcaa
ggtggtaatgatcgtacacaattctacgcttcagcatcttataaatacaataagggtact
acaccacgcaacacctttaaccgtctgtcgttcttaggaaaagcttcacaaaagattggg
aacatcatgacggtagatttcagcgtgaactttacgcaatcacagccccgtaatgcacca
ttaaacattggagaatactttgctaatagtacgttcccacgtgaatacgacgttaatcgt
tatcgtaacctttacaaaggggaacatggtggacttgccagcgaaagatatggtgatctc
tatcgtgctgtacctggcaaggaactgtggtggagtatctttgaaaacgattacaaacaa
acagaaaccatgttcaggcctgtgcttaacatcaatattcaagcactgccttggctacaa
ctttcaactggtggttcgctcaactattatgccatcgatggcgagctaaaagcccctggt
agtggttatgccaacgaaggtgggtcttatgcactctcacacacgcacactacacaagag
aacctgtaccttgcggccaacctaaactatcaaattaataaggactgggaagtacatggg
ttcttacgcgaggaatattttaaccaatatgcacagtataatagcgagagtacgaacggt
ggacttattgtgcccaaccaattctttatcaagaattcaaaacaacaagccagctttaat
gcgtataaattcaacaccaagcgtatcgtctctaccatctttatgattggaacaagctgg
aagaatcaactattcttggacataacgggacgtaacgactggtcctcagccttggtttac
agctacggaacaggtaatttctcttatttctatccttctgtttcgggctcatggatcatc
acagaaaccttcaaagacaaacttccaaaatgggttagctttgcaaaggtacgcggttct
tgggcgcaggtgggaaacgacacctctccttattatataaattcgggctattctgtggca
acatatcaacgtggcgacaagaaaatctatggaatgactatccctgagaatatgaagagt
accaacttaaaacctgaacgtaagaatgcttgggaagtgggacttgactggcgtttcttt
gacagtaggattggggtagacctcacctattataaggagaacactcgaaaccaaattatg
actatcaatgtaccttgggaatcgggcgtaaaagaaaagctaatcaacgctggtaatata
cagaactcaggtatagaaatagcactcaacacaactcctataaagaagaaacaatggcaa
tgggacctaaatttcacctacactcgcaaccgcaataagattgtagaactaagtcctgat
gtaacctcttacattaatctggatggtgcagcaaactatggtaactaccgcatagcatct
gttgccaaagtaggctccgactatggtatgctaatgtctgactcttggataaagaccgac
gaaaagactggcaaaccagtggtaggctacactaacaaattccgaacagtgtattataag
cgcggaggtactgtgaaagaagttggatcgatgttgcctaacttccttggatcactaaac
tctaccctaagatggaaagaccttagtctctatgtgctatttgacgcacgctttggagga
tacgttgcttcgtataactcacgctacgcaactgcatacggtttctctggagagaccgag
aaataccgtaaggggatgacctggaccagcaaatacgctaatgcgcaagataaggtgttt
actgatggctttatccctgatgtcgttttcgatgcaggaactattgttaccacaccagga
ggaactaaccaagacgttagtggaatgacctatcaggaggcttatgaaaaaggttatgta
gaacctgcacacctacaaagtgctgcatactttaagaatagctggggaacaggtgttatt
aacgatgattggtttaagaaaatcaactacatcgctctgcgagaaataactctctcgtac
aacgttccaaccaaaattagcagctatatcggtgcaaagaacttatcccttagtttcacc
ggacgtaacttggcatacctactgaacactgcgccaaatcacgagaatcctgaatcggta
cgtggaacaggagctgcgcagttccgtatgcgatcatttatgccttacacagcaagctat
ctcttcacattaaacgctacattctaa
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