Prevotella melaninogenica: HMPREF0659_A5418
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Entry
HMPREF0659_A5418 CDS
T01286
Name
(GenBank) putative penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz00550
Peptidoglycan biosynthesis
pmz01100
Metabolic pathways
pmz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0659_A5418
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HMPREF0659_A5418
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmz01011
]
HMPREF0659_A5418
Enzymes [BR:
pmz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HMPREF0659_A5418
Peptidoglycan biosynthesis and degradation proteins [BR:
pmz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HMPREF0659_A5418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF6057
Motif
Other DBs
NCBI-ProteinID:
ADK96017
LinkDB
All DBs
Position
I:549199..551565
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AA seq
788 aa
AA seq
DB search
MKNYDLEKRRLVLSAVAIGIVVIYIIRLFALQIASDDYRKSADSNAFLKKIEFPSRGSIT
DRNGKLLVFNQPAYDIMVVTNEMKGHLDTLEFCKALNITKADFINRMANIKDRSKNPGYS
RFTQQLFLSQLSDKDFSAFQEKLYRFPGFYIQKRSVRQYQRAIAAHVLGDVAEVSQGDIE
EDEYYQPGDYIGKMGVEREYEKDLRGVKGVQILLRDAHGQIQGRYQNGKYDQRPHPGRDI
QLGLDAELQALGERLMEGKLGAVVAIEPKTGQILAMVSAPTFDPRSMIGKLRGKYQRDMT
LDPAKPLLNRAIMGQYPPGSTFKTGQAVTYFTEGIVTDSTRYPCHHGFNFKGLHVGCHAH
ASPISLVPSISTSCNSYYCWGLYHMLSNRRKYKTLEDAMNVWRDYMVSMGFGYKLGIDLP
GEKRGMIPNAKFYDNAFKKWNPLSVISISIGQGEVNLTPLQIANLGATIANRGYYIAPHV
VRSIQGKKLDKKYVEKHHTKGSLRAYQEVIAGMVSSVRGGTCAHAVHPGYSLAGKTGTAQ
NRGKDHSVFMGFAPVDTPKIAIAVYVENGGFGADYGVPIGSLMIEQYINGKLTPGDEARA
AAVQKRHIAYSFKRPLSRADSLRLDSIKRVNTIRDSLKKVKEKQDLADAEKLKEAKARKE
AEEKEKKKQPQNEPAIRVEPETTVKTEKKEKDKEGDKKEKEKEKNKDSRKDNKEKSKVKE
KPKEQSKDKAKEQPKVKSKEQTKEKPKEQPKAKPKEQVKDKPKEQPKEKSKGQSNDKQKS
KEKVNRAK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattacgatttagaaaagcgtcgcctcgtgcttagcgctgttgcaataggtatc
gtggtgatatatattatacgtctttttgctcttcagatagccagtgacgactatcggaag
agtgccgactctaatgctttcttaaagaagattgagttcccttcacgtggttctatcact
gataggaatggtaagttgctggtttttaatcagccagcttatgacattatggtggtaacc
aacgagatgaaaggtcatcttgatacattggagttttgtaaggcactaaacataacaaag
gctgattttatcaaccgaatggctaacatcaaggatagaagtaagaatccgggttactct
cgctttacgcaacaactattcttgagccaattgagtgataaagactttagtgccttccaa
gagaaactttatcgttttccaggcttttatattcagaaacgtagtgttcgccagtatcaa
cgagctattgctgcacatgtccttggagatgtagcagaggtgagtcagggtgatattgag
gaagatgagtactatcagccaggagattatatcggtaagatgggtgtcgagcgtgagtat
gagaaagacttacgtggagtaaagggagtacagatacttctgcgtgatgcccacggacag
atacagggtcgctatcagaatggtaagtatgaccagcgtccacatcctggacgtgatatc
caacttggtcttgatgcagaacttcaggcacttggtgaacgtctaatggaaggtaaatta
ggtgctgttgtggcaatcgaaccaaagactggacaaatcttagcaatggtttctgcacct
actttcgaccctcgttcgatgataggtaaactgcgtggtaagtaccagcgagatatgacg
ctcgacccagccaagcctctacttaatcgtgctataatgggtcaataccctccaggttca
acgtttaagaccggacaggctgttacttatttcacagaagggattgtgacagactcaact
cgttatccttgtcatcatggattcaactttaaaggacttcatgttggttgtcacgcacat
gcatctcctatctcattagtaccttcaatcagcacctcttgtaatagttattactgttgg
ggactctatcatatgctctccaatcgtaggaaatataagacattggaggatgctatgaac
gtgtggcgcgactacatggtatcaatgggtttcggttataaattaggtattgatcttcct
ggtgagaagcgcggtatgattccaaatgcgaagttctatgataatgcttttaagaaatgg
aatccgctttcggttatctctatttctatcggtcagggtgaggtcaaccttactccactg
cagattgctaacctcggtgctacgattgcgaatcgtggttattacattgcgccacatgtt
gtacgtagtattcaagggaaaaaactcgataagaagtatgtggagaagcaccatacaaag
ggaagtctaagagcttaccaagaagtaatagcgggtatggtttcatcagtacgtggtgga
acttgtgcgcatgcggttcatcctggttactcattggcaggtaagacgggtacggctcag
aaccgtggtaaggaccactctgtgtttatgggctttgcacctgttgatactccaaagata
gctattgctgtttatgttgagaatggtggatttggtgcagactacggtgtgccaattggt
tcgctaatgatagagcagtatattaatggaaagcttactcctggtgatgaagctcgtgct
gcagcggttcagaaacgtcatatcgcttactcctttaagcgtcctttgtcacgtgctgac
tctcttcgtctcgactctattaagcgtgtaaatactattagagactcgctgaagaaggta
aaagagaagcaggatttagctgatgcagaaaagctgaaggaagcaaaggcaagaaaagaa
gctgaggaaaaggagaagaagaagcaaccacagaacgaacctgctatccgtgtagagcct
gaaacaacggttaagacggagaagaaagagaaggataaggaaggcgataagaaggaaaaa
gaaaaagaaaagaataaagacagtcgaaaggataataaggaaaagtctaaggtgaaggaa
aagcctaaggagcaatccaaagacaaagcaaaggaacaacccaaggtgaagtctaaggaa
cagacgaaagaaaagcctaaggagcaacctaaggctaaaccgaaggaacaagtaaaagat
aaaccaaaggaacagcctaaagagaaatcaaagggtcaatccaacgataaacaaaaaagc
aaggagaaagtaaatcgtgccaagtaa
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