Prevotella melaninogenica: HMPREF0659_A5422
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Entry
HMPREF0659_A5422 CDS
T01286
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz03030
DNA replication
pmz03430
Mismatch repair
pmz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0659_A5422
03430 Mismatch repair
HMPREF0659_A5422
03440 Homologous recombination
HMPREF0659_A5422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmz03032
]
HMPREF0659_A5422
03400 DNA repair and recombination proteins [BR:
pmz03400
]
HMPREF0659_A5422
Enzymes [BR:
pmz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0659_A5422
DNA replication proteins [BR:
pmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0659_A5422
DNA repair and recombination proteins [BR:
pmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0659_A5422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
TIP49
AAA
Mg_chelatase
RuvB_N
GAD
Motif
Other DBs
NCBI-ProteinID:
ADK96424
LinkDB
All DBs
Position
I:complement(555357..556496)
Genome browser
AA seq
379 aa
AA seq
DB search
MNFSEVIGQEAVKERLIQMVKEDRLPHALLFCGPQGAGKMALAMAFASYLLAGDEAEEAT
SSTVSNARAMLRNWEHPDLHFSYPTIKLPSMSGEHQPVSADFAKEWHGLIMQGTYFTMNQ
WMNQMGATTQQAIITGAESDELSRVLALKSSQGGYKVSIIWLPERMNLTSANKLLKLLEE
PPQGTIFLMVCEEPEKLLETIISRTQRIDVKRINDEAIEQALINKRGIDTDAAHRIARIA
NGSWLKALEAMDTGNENREFHNMFQMLMRLCYLRNVKDLKRWSEVVAGYGREKERRMLTY
FQQQVRENFMFNFQTPELNYMTLEEENFAKNFARFINEANVIEINELFQRANRDIGQNAN
AKIVFYDMALKLIVLLLKK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttcagaagttataggacaagaagcagttaaggaacggcttattcagatggtt
aaagaagaccgtctgccccatgccttgcttttctgcggaccacaaggggcgggtaagatg
gcacttgcaatggcttttgccagctatttgcttgctggtgacgaagctgaggaagctacg
tcatcaaccgtatcaaatgctcgtgccatgcttcgaaactgggaacatcctgaccttcac
ttctcttatcctaccatcaaactaccgagcatgagtggtgaacaccaacctgtaagtgca
gactttgcgaaggaatggcacggactcatcatgcaagggacttacttcaccatgaatcaa
tggatgaatcagatgggggctaccacacagcaggctatcatcacgggtgctgagagcgac
gaactgtcacgcgttttggcgttgaaatcaagtcaggggggctataaggtgtctatcatc
tggctgccagaacgaatgaatctcacctcagccaataagctattgaagctattagaggag
ccaccacagggcactatcttcctcatggtatgcgaagaaccagagaaacttctcgaaact
atcatcagccgtacacagcgtattgatgtgaaacgcatcaacgatgaggcgattgaacaa
gcactcatcaacaaaagggggattgatactgatgcggcacaccgcattgctcgtatcgca
aatggtagttggctgaaagcattggaagcaatggatacgggtaatgaaaaccgtgaattc
cacaacatgttccaaatgcttatgcgcctatgttaccttcgtaacgtcaaagacctcaaa
cgttggagcgaggttgtagcaggatatggacgtgagaaagagcgtcgtatgcttacttac
ttccaacagcaagtgcgcgagaacttcatgtttaacttccaaacgcccgaactcaactac
atgactttggaggaagagaacttcgctaagaacttcgcacgattcatcaacgaggcaaac
gtcattgaaatcaacgaactcttccagcgtgctaatcgtgatatcggacagaatgcaaac
gctaagattgtcttctatgacatggcattgaaactcattgtgctgttgttgaagaagtag
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