Prevotella melaninogenica: HMPREF0659_A5485
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Entry
HMPREF0659_A5485 CDS
T01286
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmz
Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmz03016
]
HMPREF0659_A5485 (truB)
Enzymes [BR:
pmz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMPREF0659_A5485 (truB)
Transfer RNA biogenesis [BR:
pmz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0659_A5485 (truB)
Prokaryotic type
HMPREF0659_A5485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADK96136
LinkDB
All DBs
Position
I:complement(641620..642318)
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AA seq
232 aa
AA seq
DB search
MNFKEGVIIPIDKPYGITSFKALAHVRYLCTQANDGKVKIGHAGTLDPLATGVLILATGK
MTKQIETLQTHTKEYTATLQLGATTPSYDMEHEVNETFPTEHITMELIDATLPQFVGNIE
QIPPTYSAVKVDGKRAFDYRRKGKDVTLKPKNIRIDEIEVVDFDAEKMQLSIRVVCGKGT
YIRALARDLGRAVNSGAYLTALRRTRVGDVRVEDCVNYDQFEAWLQQQTIEK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaaagaaggagtaatcatccctatcgacaagccctacggaatcaccagtttc
aaggcattagcgcacgtacgctacctttgtacacaggcgaatgacggaaaagtaaagatt
ggtcatgcaggtactttagaccctttggctacaggagtactcatccttgctacgggtaag
atgacaaaacagattgaaaccttgcagacacatacaaaggaatatacagcgaccctacag
ttgggagcaaccacaccaagctacgatatggagcatgaggtgaatgaaacattcccaact
gagcatattacaatggaactgatagacgctacacttcctcagtttgtgggtaatatcgag
cagattccaccaacttacagtgctgtaaaggtggatggtaagcgtgctttcgactatcga
agaaaaggtaaggatgttacgttaaaacctaagaacattcgcattgatgagatagaagta
gtagacttcgatgcagagaagatgcaattatcaatccgtgtcgtctgcggtaaaggtact
tatatccgtgcattagcacgcgaccttggacgagcagtgaatagcggagcctatcttaca
gcattgcgccgcacacgtgttggagacgtaagagtggaagactgcgtcaattatgaccag
tttgaagcatggcttcagcaacaaacaatagaaaaataa
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