Prevotella melaninogenica: HMPREF0659_A5554
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Entry
HMPREF0659_A5554 CDS
T01286
Name
(GenBank) SNF2 family N-terminal domain protein
Organism
pmz
Prevotella melaninogenica
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
CARD
AAA_34
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ADK96397
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Position
I:complement(729993..734024)
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AA seq
1343 aa
AA seq
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MLSFSSLNSNERTLLMLMAYFYKYGQTKKKLSNLLEKIMLPSLSDLAFKKLMTDGLLVEV
NLHYYGGGKVLYINKDMLIPSLFELFKEENSLLLQNIRRLYKKTYNNEKPSPLVRLIIYY
IATNAEEAVSTPYAQILESFNDCCLNLIDEREYETFFLSMPTELLSFVLNATLRMAMARD
KVMDWEYLKGLVFSRKKIGNSVAKKSDLESVFAYYYYLGTGKICINLKTSVSNIFTLQIA
AIDALYKEDYALAYKLYTKVMTANNKVAPIKGLFVNPIANYYFSLAAIFTNTETSLKKLE
TMMKRNGDREYTPTYFLVQPLKAYFYDKSDANIRKESYLESCGKPDMQMVSWLTWTMYPS
FGILPKKATKPMAPPNWAFLQLETGIMKSSSSEANMVKDFGGTSLLSRLEVKSLWQLRLE
TLIAENQAVGNQTTEIVRDTMLVYLLRYGIVVPILKRRLKNGSWSVGKELSVRELINLDV
PGLDSVDQRIKEGIFSWEYSVYIEKYLYLFVDCDHIYTGSTYDLQPVKIHKDNPHLIIDK
RSDGSFSVSTNVKELQRGEKSSFFYKKNSETDYSVFTPSEFEYKTYKEILTQSIYPAEAE
PYLIKLITAIGGKTEIHSNMIAELDSMKKVDISPCITLRIVPDKNYSFLMTASVRASESM
LFVPGKGNITTIAEHEGRKVQLVRNLKKERECLKTINEGLVESEVFEEEDTWTPQSINEP
LTLSLLSLLPFINWCKEHQDICTLEWAEGCKINYYPNISSSTTQISFSSKNGWFEVEGNV
QISEGQVISLQKLLELMRQSYKQKYIRISDNEFITLSSQLSRILKRLDTVTTENHSHLQM
SPAGVSLLGDLLDDTSLDIKSNKTIDELRQRIEACSKKSPVVPKTLQAQLRDYQQEGFEW
MSRTTSWGAGVCLADDMGLGKTIQTITLLLEQSENGASLIVAPASVVPNWRNELQRFAPT
LNLTILNQSEDRSKDIKEAKAGDVIITTYGLLNIQQDDLTGREWNVVCLDEAHTIKNANT
KMSKAAMLLKAQHKVILTGTPIQNHLAELWNLFQFINPGLLGSAEQFRKKFILPIEGDND
KARQSQLRRLISPFLLRRTKAEVIDELPAKNEIKLPVELSSEEMAMYEVKRRETEAKILE
NKADKVSTLAELTHLRQMACSCSLVDKKWKLPSSKVLAFIDLAESLNDSDNRALVFSQFT
SFFEEVRKAMDKAKLPYLYLDGSTSMAMREKLVKEFQTGKCPFFLISLKAGGLGLNLTGA
NYVVHLDPWWNPAIEQQATDRAYRIGQQQDVTVYHLISQHTIEEKILRLHKTKRNLSDSL
LEGSDISHAMTQEELLELLQDNR
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgctttcattctcttctcttaattccaacgagcgcacacttcttatgctgatggcttat
ttttacaaatatggtcaaactaagaaaaaactatcaaacttgttggagaagataatgttg
ccatctctttccgatttggcttttaaaaagttaatgaccgatggtttactggtagaagta
aatcttcactattacggaggtggaaaagtattatacataaataaggatatgctgattcct
tctctctttgaacttttcaaagaagaaaacagcctattattacagaatattcgcagactt
tataaaaagacttataataatgaaaaaccatctcctttggtgcgtttgataatatattac
attgcgacaaatgcagaggaagctgtatctactccctatgcgcaaatcttagaatcgttc
aatgactgttgccttaacttgattgatgaaagagaatatgagactttctttctatcaatg
cccacagaattattgtcttttgttctgaatgcaactcttcgtatggcaatggctcgggat
aaagtaatggactgggaatatttaaaaggacttgttttcagtcgtaaaaaaataggcaat
agtgtagcaaaaaaaagcgatttagaatcagtctttgcttattattactatttaggtaca
ggtaaaatctgtattaatctcaaaacatctgtaagcaatatctttacacttcagatagca
gcaattgatgcattgtataaagaagattacgctttagcctataagctatataccaaggtg
atgacggctaataataaggtagcgcctattaagggactttttgtaaatccaattgctaat
tattatttctcacttgcagctatctttaccaacacagagacctctctgaagaagttagaa
acgatgatgaagcgtaatggggatagagaatacacgcctacatacttccttgtacaaccg
ttgaaggcttatttttatgataagtctgatgcaaatatacgaaaagaatcttatcttgaa
tcgtgtgggaaaccagatatgcagatggtatcctggcttacttggacgatgtatccgtct
tttggcatacttccgaaaaaagcaactaagcctatggccccacctaactgggctttctta
cagctagagactggcattatgaagagtagctcttctgaagcaaatatggtgaaagacttc
ggtggcacatcgctgttgagccgattagaagtaaaatctctttggcagcttcgccttgaa
acgctaattgcggagaatcaagcagtagggaatcaaacaacagagattgttcgagacaca
atgctcgtatatctgttgcgttatggaattgttgttcccattcttaaacgtaggttgaaa
aatggtagttggtctgtgggtaaggaactttctgttcgtgaacttataaatctggatgtt
ccgggcttagacagtgttgatcagcgtattaaagaaggaatcttttcctgggaatatagt
gtctatattgaaaagtatctgtatctttttgttgattgtgaccatatctacactggttcc
acctatgacttgcagcctgtgaagattcataaggacaatccacaccttataatagataaa
cgttcggatggttctttcagtgtctctacgaatgtaaaagagttacaaagaggtgagaag
tcgtctttcttttataagaagaattcagaaacagactattctgtctttaccccttctgag
tttgaatacaagacttataaggagattctcacacagagcatttaccctgcagaagccgag
ccctatcttatcaagttgattacagctattggaggcaagacagagatacactctaatatg
attgcggaactcgattctatgaagaaggttgacatctcaccatgtatcaccctccgcatc
gttccagacaagaactacagcttcttaatgactgcctctgtacgagcttcagaaagtatg
ctatttgttccaggaaaaggtaacatcactacaatagctgaacatgaagggaggaaggtg
caactggtgcgaaatttaaagaaagaacgggaatgtttaaagactatcaatgaaggttta
gtagagtcagaagtcttcgaagaagaagacacatggactcctcagagcatcaacgaacct
ttaaccctatcacttctgtcattacttccgtttatcaattggtgtaaggaacatcaagat
atatgcactttagaatgggctgaaggctgtaaaattaattattatcctaatataagtagc
agtacaacacaaatttctttcagctcaaagaacggttggtttgaagttgagggaaatgta
caaataagtgaaggacaagttatatccctccagaaacttcttgaactaatgcgacaaagc
tataaacagaagtatattcgcattagtgacaatgagtttatcacccttagtagccagctt
tcacgtatactaaaacggctcgacacggtgacaacagaaaaccactcacacttacagatg
tctcctgctggcgtttctttattaggcgatttattagatgatacatctttagatatcaag
agtaataagacgatagacgaattgcgccaacgtattgaggcgtgcagtaagaagtcacct
gtagtccccaagaccttacaggcacagcttcgcgactaccagcaggagggatttgagtgg
atgtcaaggaccacttcgtggggagcaggtgtatgccttgccgacgatatgggattagga
aagactatccaaaccatcaccctactgcttgaacaaagtgaaaatggagcctcattgatt
gtcgcaccagcctcagtcgtccccaactggcgcaatgaactccagcgttttgcaccgacg
ttgaatcttactattctcaatcagagtgaggatcgttcaaaagatattaaggaggcaaag
gctggagatgttattatcaccacgtatggtttgttgaatattcagcaggatgacctcact
gggagggaatggaacgtagtctgtcttgatgaagcacataccatcaaaaatgccaataca
aagatgtcaaaggcggctatgctgttgaaggcacagcacaaggttatccttacgggtact
cctattcaaaaccatcttgcagagttatggaatctcttccagtttattaaccccggtctt
ttaggaagtgcagaacaattcaggaagaagtttatcctgcctattgaaggagataacgac
aaagcacgccaaagccagttacgccgtctgatttctccgttccttttgcgtagaacaaaa
gcagaggtcattgacgaattacctgcaaagaacgaaataaaactccctgttgaactatca
tcggaagagatggctatgtatgaggttaaaaggagagaaacagaggcgaagattcttgaa
aataaagctgacaaggtaagtacgttggcagagcttactcatttgcgccagatggcgtgt
agctgttcgttggttgacaagaaatggaagctaccaagcagcaaagtacttgcgttcata
gacttggcggagagtctcaacgacagcgataatcgtgcacttgttttcagtcagtttacc
agtttctttgaagaggtaagaaaggcgatggataaggcaaaacttccatatctttacctt
gacggaagcacctcgatggctatgcgcgagaagctggtaaaggaattccaaacaggaaaa
tgtcctttcttccttatcagtctgaaggctggaggattgggactgaatcttacgggtgct
aactatgttgttcaccttgacccttggtggaatcctgccatcgaacagcaggctaccgat
cgtgcctatcgtataggacaacaacaggatgtaacggtttatcatcttattagtcagcac
actatcgaggagaagattctacgcttacataagacaaaacgtaatctttccgactcgctt
cttgaaggttctgatatctctcatgcaatgacacaggaagaattgctcgagttgttgcaa
gataacagataa
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