KEGG   Prevotella melaninogenica: HMPREF0659_A5723
Entry
HMPREF0659_A5723  CDS       T01286                                 
Name
(GenBank) type III restriction enzyme, res subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pmz  Prevotella melaninogenica
Brite
KEGG Orthology (KO) [BR:pmz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmz02048]
    HMPREF0659_A5723
Enzymes [BR:pmz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HMPREF0659_A5723
Prokaryotic defense system [BR:pmz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HMPREF0659_A5723
SSDB
Motif
Pfam: SWI2_SNF2 ResIII HSDR_N T1R_D3-like DEAD ATPase_2 AAA_19 AAA_22 AAA_30 UvrD-helicase
Other DBs
NCBI-ProteinID: ADK96162
LinkDB
Position
I:complement(914079..917708)
AA seq 1209 aa
MATSNLNETTFEEHIAQQLAGSDLYNQRTSRDFDIEHLCDREMLERFLRQQPAVWAMLEH
AFPGQETDEVVKQLNSQLNRGESMLKIFRKGFKIRGKDIKFAQFKPVLAGEDSEAYRLYR
SNTFSIVRQMRYSTACSDKGNELDMCILLNGLPLFTFELKNEGTGQNYANGIYQYRYDRN
PENRMLRHCLVHFVMDNNYVFMTTRLKGAETKFLPFNQDSVNPPIEDEYPVAYMWQHILQ
ADSILDLLENFIKRYNDEDGKPVVIFPRFHQLRAVRKLRRKVSEEGAGHNYLVWHSAGSG
KTKTMAWLAHQLANMTNEDHSCVFDSIIMVTDRIVLNRNMAEDVVNFEDVVGTVKDVRHG
SKNLATAIDEGHRIIISTVQKFAFALKTLKREKHRQYAVIIDEAHTAVGNESAKDLVNAL
STDEDLKNIPDFNPDEFEDEMDAFMAYQQIMRRSMHHMSYFAFTATPKDKTFVLYGDENH
KEHDLYSMKQAIDEKFILDVLQNYKSYQTMFELIETTTDPEEKKKRFEEKKSLALIYGEL
NKNSYIMLRKATMMVDHFMKHTIGKIGGEAKAMVVCDSRRAAADYKRIIDKVIEQNYHGV
IKTLVAFSGEVEDSHGHKCTEASMNDEGVHDDGIRIKFKGSDYKILIVANKFQTGFDQPL
LHTMFVDRSLGGIQCIQTLSRLNRCCPGKDDTMVIDFRNNPEDVKAAFQRYYTDIDLLGE
VDTQRMYTMMDDVNRWRIFSDDDVNRVVKMLQRKETAVGVPSLLKTIVTERVEPMTDEEK
DRYRKYVNRYMRQYGFMAQLMDFVDPDLEKFYVFCRVFYKYLPYTKETLPMEVLDRIDLD
KLRIQLNFDGQLELEDEDQQMASSRIGEVGQKQEDEKKTIAEILDIANSPFQDLLNENDK
ILKQIWIDILQDPDVTDAFSAGNSYDALIALVKEKFDEKVADQIEKYYNFQEELEKNQSF
SMMLIRKFVDALAMRSRKASELAYDENTLKEALMVSLGEEFVDVCSHVRSFDEFVDVFFA
VLNRSSLPSLDGADGIIKNALNNIYCNDHLQNFDKQTYFNSLLSKYESYLKKLYYLCHGE
EVPSSTGDTDHSTLANAIHGFKCLWNLRHAATEEGKRFSGYLDMVRQWRNDEAHRAPITT
DEEVNAAIKVLVAMYLFVTGNSITDLEMQEGAGTPTIKQDPDSHPQGYEAFEEDHLGYSV
AAEPEPGEE
NT seq 3630 nt   +upstreamnt  +downstreamnt
atggcaacaagcaatcttaacgagacaacttttgaggagcatattgctcagcagttggct
ggcagcgacctctataatcagcgcaccagccgcgactttgacatcgaacacctctgcgac
cgagagatgctggaacggtttctccgccagcaacccgctgtatgggcgatgctcgaacat
gccttccccgggcaggagaccgatgaggtggtgaagcagctgaacagccagttgaaccgt
ggcgagagcatgctcaaaatcttccgcaagggatttaagataagggggaaagacatcaag
tttgcccaattcaaacctgttctcgccggggaggacagtgaggcttatcggctctatcgg
tccaacactttcagcatcgtgcgccagatgcgctatagcacagcctgcagcgacaagggc
aacgaacttgatatgtgcatcctgctcaacggtctgccgctcttcaccttcgagctgaag
aacgagggtacggggcagaactatgccaacggcatctaccagtaccggtacgaccgcaat
cccgagaaccgaatgttgcggcattgcctggtacacttcgtgatggataacaactatgtg
ttcatgaccacgcggctgaaaggtgccgaaacgaagtttctgcctttcaaccaagacagc
gtgaacccgcccatcgaagacgaatatcccgtggcctatatgtggcagcacatcctacaa
gccgacagcatactggacctactggagaactttatcaagcgatacaacgatgaagacggc
aagcccgtggtgatctttcctcgtttccatcagctacgagccgtgcggaagctacgccga
aaggtgagcgaggaaggtgccgggcacaactacttggtgtggcattcggcaggctcgggc
aagaccaagaccatggcgtggctggcccaccagctcgccaacatgaccaatgaggaccac
agctgcgtgttcgacagtatcatcatggtgaccgaccgcattgtgctcaaccgcaacatg
gccgaggacgtggtgaacttcgaggacgtggtgggcaccgtgaaagacgtgcgccatggt
agcaagaacctcgccaccgctatcgacgagggccaccgtatcatcatcagtaccgtgcag
aagtttgcctttgcgctgaaaaccctgaagcgcgagaagcaccgccaatatgccgtcatc
attgatgaggcccataccgccgtgggcaacgagagtgccaaagacctggtgaacgccctg
agtactgacgaggacctgaaaaacattcccgacttcaaccccgatgagtttgaagacgag
atggatgctttcatggcctatcagcagattatgcgccgctccatgcaccacatgagctac
ttcgccttcaccgccaccccgaaggacaagacctttgtactctatggcgacgagaaccat
aaggagcacgacctctactcgatgaaacaggccatcgacgagaagtttatcctcgatgtg
ctgcaaaactacaagtcgtaccagaccatgtttgagctcatcgaaacgaccaccgacccc
gaggagaaaaagaaacgctttgaggaaaagaagtcgctcgccctgatctatggcgagctg
aacaaaaactcctacatcatgctgcgcaaggccacgatgatggtagatcattttatgaag
cataccatcggcaagattggcggtgaagccaaggctatggtagtgtgcgactcgcgccga
gccgccgccgactataagcgcatcatcgacaaggtaatagagcagaactatcatggcgtg
atcaagaccttggtggccttttcgggtgaagtggaagacagtcatgggcacaagtgtacc
gaggccagtatgaatgatgaaggcgtgcatgacgacggcatccgcatcaagttcaagggg
agcgactataagatactgattgtggccaacaagtttcagacaggcttcgatcagccgctg
ctccacaccatgtttgtggaccgctcactcggcggtatacagtgcatccagacgctgagc
cgcctgaaccgctgctgtccgggcaaggacgacaccatggtcatcgacttccgcaacaat
ccggaagacgtaaaggcagccttccagcgttactacaccgacatcgacctcctgggcgag
gtggacacgcagcgtatgtacaccatgatggatgacgtgaatcgctggcgcatattcagc
gatgacgacgtgaatcgcgtggtgaagatgctccagcgcaaggagacggcagtgggcgtg
ccgtcgctactgaagaccatcgttaccgagcgtgtggaaccgatgaccgacgaggagaag
gaccggtatcgcaaatatgtgaaccgctatatgcgtcagtatggtttcatggcgcagcta
atggacttcgtcgatcccgacctggagaagttctacgtgttctgccgtgtgttctacaaa
tatctgccctacaccaaagaaaccctccctatggaggttctcgacaggattgaccttgac
aagctgcgcattcagctgaattttgacgggcagctggagctggaggacgaggatcagcag
atggcatcgagccgcataggtgaagtgggacaaaagcaggaggacgagaagaagacgata
gctgaaatccttgacattgccaacagtccgttccaagacctgctcaatgagaatgacaag
atattgaagcagatctggatagacattctgcaagatccggatgtaacagatgccttcagt
gcaggcaattcctacgatgccctgatagcacttgtcaaggagaagtttgacgagaaggtg
gccgaccagatagagaaatactataacttccaggaggaactggagaagaaccagtcgttc
tcgatgatgcttatccgcaagtttgtggatgcactggccatgagaagccggaaggccagc
gaacttgcctacgatgaaaatacactgaaagaggcgctgatggtcagcctcggcgaggag
tttgtggatgtgtgcagccatgtacgctcgttcgatgagtttgtggatgtgttcttcgca
gtgctcaaccgcagcagcctgccttcgctcgacggtgcagacggcattatcaagaatgcg
ctgaacaatatctattgcaatgatcatctgcagaactttgacaagcagacctatttcaac
agcctgctttctaagtatgagagctatctgaaaaaactttattacctctgccatggcgag
gaagtgccgtcgtcaacaggagatactgaccattcaacattggcaaatgccatccatggt
ttcaaatgtctctggaatctgaggcatgccgccacagaggagggcaagcgtttcagtggc
tatctggacatggtgcgtcagtggcgtaatgatgaagcacatcgtgcgcccatcacaact
gacgaagaggtgaacgccgccatcaaggtgcttgtggccatgtacttgtttgtgacagga
aactcaataaccgatttggagatgcaggagggtgcaggaacccctactatcaagcaggat
cctgattcccatccccaaggttacgaagcgttcgaggaggaccatcttggatattctgta
gccgcagagcctgaaccgggcgaagagtaa

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